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Ig5326_scaffold_2642_2

Organism: bjp_Ig5326_Hor_140_2015_Hydrogenophilales_65_5

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 786..4184

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 999.99
  • Bit_score: 1902
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Thiobacillus thioparus RepID=UPI00036D1DB7 similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 999.99
  • Bit_score: 2084
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 999.99
  • Bit_score: 1902
  • Evalue 0.0
  • rbh

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3399
ATGGCGCTCCTCTTCCCCCCATCCCGATCCGCCGGCCCCTTGCGCGGCCAGTCCGGCCTCGCCGGCGCGGCCGACGCGCTCTATCTGGCCGAGATGGCGCGCCACGCCGCGCCGCTGGCGGTGGTGTGCGCCAGCGCCTGGGACGCCAACCGCCTGACCGAGGAATTGCGCTGGTTCGACCCCGCCCTGCGGGTATGCGTGTTTCCCGACTGGGAAACCCTGCCGTATGACAGCTTCTCGCCCCACCCGGACCTGATATCGGAGCGGCTGGCGACGCTGTACCAAATCTCGCGCGGCGAGTTCGACATCGCGGTGGTGGCGCTTTCCATCGCGCTGTACCGGCTGGCGCCGCCCGCCTTCCTCGCCGCCCACACGTTTTTCCTCCAGCAGAAGGACACGCTGGACGAAGCCGCCTTCCGCGCGCAGATGGCGCTGGGCGGCTACACGCACGTCAATCAGGTGTTCGCGCCGGGCGAATTCTCGGTGCGCGGCGGGCTGATCGACCTCTTTCCCATGGGCAGCGCCCTGCCCTACCGCATCGACCTGTTCGACAACGAGATCGAGACGCTGCGCGCGTTCGACGTCGACACCCAGCGCAGCATCTATCCGGTGAACGAGGTGCGGCTGCTGCCGGCGCGCGAATTTCCGCTCGACGAGACCGGCATCACCCGCTTCCGGCAGAATTTCCGCGAGCGCTTCGAGGGCGACCCGTCCAAATCCAAGCTGTACAAGGACGTCAGCAACGGCCTCGCACCGGCCGGCATCGAGTACTACCTGCCGCTGTTTTTCGAGGAAACGGCGACGCTGTTCGACTACCTGCCCGCGCAGACGAAATTCGTCAGCCACGGCGCGCTCGACCCCGCCGGGCAGGCGTTCTGGGCCGACGCGCAAAGCCGGTACCGCCTGCTCTCGGGCGACAAGGACCGTCCGCTGCTGCCGCCCGCCGAACTGTTCCTTGCGACCGACGCCTTCTTCAGCCTGGCCAAGGGCTACGCGCAGTTGGATGTGGAGCAGGCCGGCGAAGGCTTGGCGCATCCGCTGCCGCCGATTGCGGTGGACCGCCGCGAAGCGCATCCGGTCGCCAAGCTCAAGGGCTTCATCGACGGCTTCGCCGGCAAGGTGCTGATCGTCGCCCCCTCGGCCGGGCGACGCGAAACCCTGCACGAATACCTCGCCGAACACGGCCTCGACGCGGCGCTCGTCGACAGCTGGGCCGACAGCCAGCAAAACGTCGGTCGCATCCTGCTGACGCACGGCCCGCTGGCCGAGGGCTTCGTTACCGCCGACGGCACGCTCGCCGTCATCACCGAAACCGAGCTCTACGCCATCCCGCCGAAGACCCGTCGCGCGCGCGAGGCGCGCGCGACGCAGATCGACAACCTGCTGCGCGACCTCTCGGAGCTGAAGCCGGGCGACCCGGTGGTGCACGCGCAGTACGGCGTCGGCCACTACCTCGGCCTCATCAACATGGACCTTGGTGACGGCGACACCGAGTTCCTGCAGCTCGAGTACGCCCGTGGCGACAAGCTCTACGTGCCGGTGGCCAACCTGCACCTGATCTCGCGCTATTCCGGCGCCGGCGAAGGCGCCGCGCCGCTGCACAAGCTCGGCACCGACCAGTGGGACAAGGCGCGCCGCCGCGCGATGCAGGCGGCACGCGACACCGCCGCCGAACTGCTGAACCTGTACGCTCTGCGCGCTGCGCGCGAGGGCCACGCGTTCAAGTTCTCGCTGCACGACTACGAGGCCTTCGCCGAAGGCTTCGGCTACGAGGAAACCCCCGACCAGGCCGCCGCGATTGCGGCGGTGATGGCCGACATGCAGGCGGGCCAGCCAATGGACCGCCTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTCGCGCTGCGTGCCGCCTTCATGGCGGTGATGGGCGGCTATCAGGTGGCGGTGCTGGTGCCGACCACGCTGCTCGCCGAGCAGCACTTCAACACCTTCTCCGACCGCTTCTCGGCCTGGCCAGTCAAGCTCGCCGAGCTGTCGCGCTTCCGCAGCCCGAAGGCGCAAACCGAGGCGCTCAAGGCCTTGGCCGACGGCAAGCTCGACATCGTCATCGGCACCCACCGGCTGATCCAGAAGGACGTCAAGTTCGCCCGCCTGGGGCTGGTCATCATGGACGAGGAGCACCGCTTCGGCGTGCGCCAGAAGGAACAGCTGAAGGCGCTGCGCGCCGAGGTCGACGTGCTGACGCTGACCGCCACGCCGATCCCGCGCACGCTGGCGATGTCGCTCGAAGGCATCCGCGATTTCTCGGTCATTGCAACGGCGCCGCAGAAGCGGCTGGCGATCAAGACCTTCGTCCAGCCGTTTTCCAGCGGGCTGATCCGCGAGGCCGTGCTGCGCGAGCTGAAGCGCGGCGGCCAGGTGTATTTCCTGCACAACGAGGTCAGCACCATCCAGGCCATGCACGAGCGGCTGGAAAAGCTGCTGCCGGAAGCGCGCATCCGCGTCGGCCACGGCCAGATGGGCGAGCGCGAACTCGAACAGGTGATCCGCGACTTCTACCAGCAGCGCTACGACATCCTGCTGTGCACCACCATCATCGAGACCGGCATCGACATCCCGACCGCCAACACCATCCTGATCAACCGCGCCGACAAGTTCGGTCTGGCGCAGCTGCACCAATTGCGGGGCCGCGTCGGGCGCTCGCACCACCAGGCCTTCGCCTACCTGCTGGTGGACGAGGATCGCACCCTGACGCCGCAGGCGAAAAAGCGTCTCGAAGCGATCCAGTTGATGGAGGAACTGGGCGCCGGCTTCCATCTCGCCATGCAGGACCTCGAAATCCGCGGCGCCGGCGAGGTGCTGGGTGAGAAGCAGAGCGGCGAAATCCTCGAAGTCGGCTTCTCGCTCTACAACGACATGCTGGCCGGCGCGGTAGCAAGCCTCAAGGCCGGCCATGAACCGGACATGAACCAGCCGCTGGGCGTGGTGTCCGAGATCAACCTGCACATGCCGGCGCTGCTGCCGGTGGACTACTGCCCCGACGTGCACGAGCGGCTGGTGCTGTACAAGCGGCTGGCGAGCGTCCACGACACGGAAGAACTCACCCAGCTGCAGGAAGAGCTGGTCGATCGCTTCGGCCGCTTGCCCGACCCGGCCCGCGCGCTGCTCGACACCCATCGCCTGCGCCTGGCCGCCAAGCCGTTCGGCATCATGAAGATCGACGCCAACGCGGACAGCATCCTGCTGCAGTTCGTGGCGCAGCCACCCATCGATCCGGGCCGCATCATCCAGCTCATCCAGACCCGGCGCGACATCAAGCTGGCAGGCGAAAACCGCCTGCGCTGGCAGGCCGGCTCGCCGCCCGAGGCGCGCGCCGCCAACGTCATCACCCTGCTCAACCTGCTGAAATAA
PROTEIN sequence
Length: 1133
MALLFPPSRSAGPLRGQSGLAGAADALYLAEMARHAAPLAVVCASAWDANRLTEELRWFDPALRVCVFPDWETLPYDSFSPHPDLISERLATLYQISRGEFDIAVVALSIALYRLAPPAFLAAHTFFLQQKDTLDEAAFRAQMALGGYTHVNQVFAPGEFSVRGGLIDLFPMGSALPYRIDLFDNEIETLRAFDVDTQRSIYPVNEVRLLPAREFPLDETGITRFRQNFRERFEGDPSKSKLYKDVSNGLAPAGIEYYLPLFFEETATLFDYLPAQTKFVSHGALDPAGQAFWADAQSRYRLLSGDKDRPLLPPAELFLATDAFFSLAKGYAQLDVEQAGEGLAHPLPPIAVDRREAHPVAKLKGFIDGFAGKVLIVAPSAGRRETLHEYLAEHGLDAALVDSWADSQQNVGRILLTHGPLAEGFVTADGTLAVITETELYAIPPKTRRAREARATQIDNLLRDLSELKPGDPVVHAQYGVGHYLGLINMDLGDGDTEFLQLEYARGDKLYVPVANLHLISRYSGAGEGAAPLHKLGTDQWDKARRRAMQAARDTAAELLNLYALRAAREGHAFKFSLHDYEAFAEGFGYEETPDQAAAIAAVMADMQAGQPMDRLVCGDVGFGKTEVALRAAFMAVMGGYQVAVLVPTTLLAEQHFNTFSDRFSAWPVKLAELSRFRSPKAQTEALKALADGKLDIVIGTHRLIQKDVKFARLGLVIMDEEHRFGVRQKEQLKALRAEVDVLTLTATPIPRTLAMSLEGIRDFSVIATAPQKRLAIKTFVQPFSSGLIREAVLRELKRGGQVYFLHNEVSTIQAMHERLEKLLPEARIRVGHGQMGERELEQVIRDFYQQRYDILLCTTIIETGIDIPTANTILINRADKFGLAQLHQLRGRVGRSHHQAFAYLLVDEDRTLTPQAKKRLEAIQLMEELGAGFHLAMQDLEIRGAGEVLGEKQSGEILEVGFSLYNDMLAGAVASLKAGHEPDMNQPLGVVSEINLHMPALLPVDYCPDVHERLVLYKRLASVHDTEELTQLQEELVDRFGRLPDPARALLDTHRLRLAAKPFGIMKIDANADSILLQFVAQPPIDPGRIIQLIQTRRDIKLAGENRLRWQAGSPPEARAANVITLLNLLK*