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ACD14_30_1

Organism: ACD14

partial RP 2 / 55 BSCG 4 / 51 ASCG 0 / 38
Location: 163..507

Top 3 Functional Annotations

Value Algorithm Source
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 114.0
  • Bit_score: 129
  • Evalue 5.80e-28
RIBOSOMAL_L20 (db=PatternScan db_id=PS00937 from=54 to=70 evalue=0.0 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=1 to=114 evalue=1.7e-41 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.70e-41

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 345
ATGAGTAGAGTAAAGCGCGGTGTAGCCGCATCAAAAAGAAGAAGGACAGTCCTGGAATTAGCTAAGGGCTTCAGATGGCGTCGAAGCAAAAACTTTGTAGCAGCAAAAGAAGCTGTTATCAAGGCTGGAAAATATGCCCACAGAGATCGTAGAGCAAAGAAACGAACAAATAGGGCTCTTTGGATCCTACGCCTAAACAATGCTGTTCGCCTATTCGACATTACCTACAGCAAATTCATTGCAATCTTGAAAGCAAAAAACATTGAAACTGATCGCAAAGTGCTTTCACAAATGGCTGCTGAAAATCCTGCAATCTTCGCAAAATTTGTTGAAAAAGTAAAATAG
PROTEIN sequence
Length: 115
MSRVKRGVAASKRRRTVLELAKGFRWRRSKNFVAAKEAVIKAGKYAHRDRRAKKRTNRALWILRLNNAVRLFDITYSKFIAILKAKNIETDRKVLSQMAAENPAIFAKFVEKVK*