Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
ECF subfamily RNA polymerase sigma-24 subunit |
KEGG
DB: KEGG |
63.7 | 182.0 | 228 | 1.50e-57 | sap:Sulac_2133 | |
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AEJ40112.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobac |
UNIPROT
DB: UniProtKB |
63.7 | 182.0 | 228 | 7.50e-57 | F8I8L0_SULAT | |
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Sulfobacillus acidophilus RepID=F8I8L0_SULAT (db=UNIREF evalue=1.9e-57 bit_score=228.0 identity=63.7 coverage=95.72192513368985) | similarity |
UNIREF
DB: UNIREF |
63.0 | 95.0 | 228 | 1.00e+00 | sap:Sulac_2133 |
coiled-coil (db=Coil db_id=coil from=118 to=139 evalue=NA) | iprscan |
interpro
DB: Coil |
0.0 | 0.0 | 0 | null | sap:Sulac_2133 |
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=18 to=179 evalue=2.1e-35 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_2133 |
(db=HMMPfam db_id=PF04542 from=24 to=91 evalue=4.7e-13 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 4.00e+00 | sap:Sulac_2133 |
(db=HMMPfam db_id=PF08281 from=125 to=175 evalue=4.5e-09 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 4.00e+00 | sap:Sulac_2133 |
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=7 to=94 evalue=5.7e-17) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 5.00e+00 | sap:Sulac_2133 |
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=111 to=180 evalue=6.3e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 6.00e+00 | sap:Sulac_2133 |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=3 to=111 evalue=8.8e-20 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 8.00e+00 | sap:Sulac_2133 |