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AMDSBA2_10_15 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
63.7 182.0 228 1.50e-57 sap:Sulac_2133
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AEJ40112.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobac UNIPROT
DB: UniProtKB
63.7 182.0 228 7.50e-57 F8I8L0_SULAT
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Sulfobacillus acidophilus RepID=F8I8L0_SULAT (db=UNIREF evalue=1.9e-57 bit_score=228.0 identity=63.7 coverage=95.72192513368985) similarity UNIREF
DB: UNIREF
63.0 95.0 228 1.00e+00 sap:Sulac_2133
coiled-coil (db=Coil db_id=coil from=118 to=139 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 null sap:Sulac_2133
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=18 to=179 evalue=2.1e-35 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
0.0 0.0 0 2.00e+00 sap:Sulac_2133
(db=HMMPfam db_id=PF04542 from=24 to=91 evalue=4.7e-13 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00 sap:Sulac_2133
(db=HMMPfam db_id=PF08281 from=125 to=175 evalue=4.5e-09 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00 sap:Sulac_2133
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=7 to=94 evalue=5.7e-17) iprscan interpro
DB: Gene3D
0.0 0.0 0 5.00e+00 sap:Sulac_2133
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=111 to=180 evalue=6.3e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
0.0 0.0 0 6.00e+00 sap:Sulac_2133
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=3 to=111 evalue=8.8e-20 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily
0.0 0.0 0 8.00e+00 sap:Sulac_2133