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AMDSBA2_19_13 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
transcription-repair coupling factor rbh KEGG
DB: KEGG
64.3 999.99 1508 0.0 sap:Sulac_0177
transcription-repair coupling factor similarity KEGG
DB: KEGG
64.3 999.99 1508 0.0 sap:Sulac_0177
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1051632 species="Bacteria; F UNIPROT
DB: UniProtKB
64.3 999.99 1508 0.0 F8I4F7_SULAT
Transcription-repair coupling factor n=2 Tax=Sulfobacillus acidophilus RepID=F8I4F7_SULAT (db=UNIREF evalue=0.0 bit_score=1507.7 identity=64.3 coverage=96.57477025898078) similarity UNIREF
DB: UNIREF
64.0 96.0 1507 0.0 sap:Sulac_0177
Transcription-repair coupling factor n=2 Tax=Sulfobacillus acidophilus RepID=F8I4F7_SULAT similarity UNIREF
DB: UNIREF90
64.3 null 1507 0.0 sap:Sulac_0177
coiled-coil (db=Coil db_id=coil from=643 to=664 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 null sap:Sulac_0177
seg (db=Seg db_id=seg from=734 to=747) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 sap:Sulac_0177
seg (db=Seg db_id=seg from=1038 to=1049) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 sap:Sulac_0177
mfd: transcription-repair coupling factor (db=HMMTigr db_id=TIGR00580 from=184 to=1118 evalue=0.0 interpro_id=IPR004576 interpro_description=Transcription-repair coupling factor GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 0.0 sap:Sulac_0177
TRCF domain-like (db=superfamily db_id=SSF143517 from=1029 to=1186 evalue=1.9e-34) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 sap:Sulac_0177
(db=HMMPfam db_id=PF02559 from=520 to=617 evalue=1.6e-30 interpro_id=IPR003711 interpro_description=CarD-like/TRCF domain) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 sap:Sulac_0177
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=589 to=882 evalue=1.4e-68) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 sap:Sulac_0177
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=165 to=252 evalue=1.5e-16) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 sap:Sulac_0177
DEAD BOX ATP-DEPENDENT RNA HELICASE (db=HMMPanther db_id=PTHR10967 from=647 to=953 evalue=2.1e-07) iprscan interpro
DB: HMMPanther
0.0 0.0 0 2.00e+00 sap:Sulac_0177
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=833 to=963 evalue=2.2e-12) iprscan interpro
DB: Gene3D
0.0 0.0 0 2.00e+00 sap:Sulac_0177
no description (db=HMMSmart db_id=SM00487 from=641 to=831 evalue=2.1e-36 interpro_id=IPR014001 interpro_description=DEAD-like helicase) iprscan interpro
DB: HMMSmart
0.0 0.0 0 2.00e+00 sap:Sulac_0177
(db=HMMPfam db_id=PF00270 from=646 to=805 evalue=2.9e-18 interpro_id=IPR011545 interpro_description=DNA/RNA helicase, DEAD/DEAH box type, N-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ATP binding (GO:0005524), Molecular Function: ATP-dependent helicase activity (GO:0008026)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 sap:Sulac_0177
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=823 to=1033 evalue=2.6e-54) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 sap:Sulac_0177
(db=HMMPfam db_id=PF03461 from=1044 to=1142 evalue=2.5e-24 interpro_id=IPR005118 interpro_description=Transcription-repair-coupling factor domain GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 sap:Sulac_0177
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=43 to=402 evalue=3.6e-60) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 sap:Sulac_0177
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=667 to=824 evalue=3.9e-06) iprscan interpro
DB: Gene3D
0.0 0.0 0 3.00e+00 sap:Sulac_0177
CarD-like (db=superfamily db_id=SSF141259 from=510 to=589 evalue=5.5e-26 interpro_id=IPR003711 interpro_description=CarD-like/TRCF domain) iprscan interpro
DB: superfamily
0.0 0.0 0 5.00e+00 sap:Sulac_0177
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=405 to=514 evalue=6.9e-13) iprscan interpro
DB: superfamily
0.0 0.0 0 6.00e+00 sap:Sulac_0177
(db=HMMPfam db_id=PF00271 from=881 to=950 evalue=8.3e-14 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 8.00e+00 sap:Sulac_0177
no description (db=HMMSmart db_id=SM00490 from=868 to=951 evalue=9.3e-20 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 9.00e+00 sap:Sulac_0177
HELICASE_CTER (db=ProfileScan db_id=PS51194 from=833 to=995 evalue=14.288 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.40e+01 sap:Sulac_0177
HELICASE_ATP_BIND_1 (db=ProfileScan db_id=PS51192 from=659 to=820 evalue=23.266 interpro_id=IPR014001 interpro_description=DEAD-like helicase) iprscan interpro
DB: ProfileScan
0.0 0.0 0 2.30e+01 sap:Sulac_0177