Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
ECF subfamily RNA polymerase sigma-24 subunit |
KEGG
DB: KEGG |
68.5 | 168.0 | 231 | 1.60e-58 | sap:Sulac_1830 | |
Uncharacterized protein {ECO:0000313|EMBL:AEW05323.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob |
UNIPROT
DB: UniProtKB |
68.5 | 168.0 | 231 | 7.90e-58 | G8U074_SULAD | |
RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Sulfobacillus acidophilus RepID=G8U074_SULAD (db=UNIREF evalue=2.0e-58 bit_score=231.1 identity=68.5 coverage=98.20359281437125) | similarity |
UNIREF
DB: UNIREF |
68.0 | 98.0 | 231 | 2.00e+00 | sap:Sulac_1830 |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=2 to=93 evalue=1.5e-13 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_1830 |
(db=HMMPfam db_id=PF04542 from=9 to=75 evalue=3.2e-08 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | sap:Sulac_1830 |
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=2 to=78 evalue=4.2e-11) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 4.00e+00 | sap:Sulac_1830 |
(db=HMMPfam db_id=PF08281 from=103 to=153 evalue=4.6e-12 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 4.00e+00 | sap:Sulac_1830 |
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=89 to=159 evalue=8.0e-13 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Functi | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 8.00e+00 | sap:Sulac_1830 |
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=3 to=157 evalue=8.8e-28 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 8.00e+00 | sap:Sulac_1830 |