Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA polymerase, sigma 28 subunit, SigI |
KEGG
DB: KEGG |
46.1 | 232.0 | 198 | 2.20e-48 | tmr:Tmar_0851 | |
RNA polymerase, sigma 28 subunit, SigI {ECO:0000313|EMBL:ADU50965.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter. |
UNIPROT
DB: UniProtKB |
46.1 | 232.0 | 198 | 1.10e-47 | E6SIX0_THEM7 | |
RNA polymerase, sigma 28 subunit, SigI n=1 Tax=Thermaerobacter marianensis DSM 12885 RepID=E6SIX0_THEM7 (db=UNIREF evalue=2.7e-48 bit_score=198.0 identity=46.1 coverage=91.869918699187) | similarity |
UNIREF
DB: UNIREF |
46.0 | 91.0 | 198 | 2.00e+00 | tmr:Tmar_0851 |
seg (db=Seg db_id=seg from=173 to=188) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | tmr:Tmar_0851 |
(db=HMMPfam db_id=PF04542 from=28 to=97 evalue=1.0e-08 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | tmr:Tmar_0851 |
spore_sigI: RNA polymerase sigma-I factor (db=HMMTigr db_id=TIGR02895 from=14 to=238 evalue=5.6e-59 interpro_id=IPR014244 interpro_description=RNA polymerase sigma-I type) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 5.00e+00 | tmr:Tmar_0851 |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=14 to=98 evalue=6.5e-16 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 6.00e+00 | tmr:Tmar_0851 |
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=23 to=228 evalue=7.3e-10 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 7.00e+00 | tmr:Tmar_0851 |