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AMDSBA2_44_4 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpoA; DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG 		82.9 315.0 527 2.00e-147 say:TPY_0350
rpoA; DNA-directed RNA polymerase subunit alpha rbh KEGG
DB: KEGG 		82.9 315.0 527 2.00e-147 say:TPY_0350
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase UNIPROT
DB: UniProtKB 		82.9 315.0 527 1.00e-146 F8I5R1_SULAT
DNA-directed RNA polymerase subunit alpha n=2 Tax=Sulfobacillus acidophilus RepID=G8TXI5_SULAD similarity UNIREF
DB: UNIREF90 		82.5 null 525 8.60e-147 say:TPY_0350
DNA-directed RNA polymerase subunit alpha n=2 Tax=Sulfobacillus acidophilus RepID=G8TXI5_SULAD (db=UNIREF evalue=7.3e-147 bit_score=525.8 identity=82.5 coverage=99.36708860759494) similarity UNIREF
DB: UNIREF 		82.0 99.0 525 7.00e+00 say:TPY_0350
seg (db=Seg db_id=seg from=107 to=120) iprscan interpro
DB: Seg 		0.0 0.0 0 0.0 say:TPY_0350
seg (db=Seg db_id=seg from=291 to=308) iprscan interpro
DB: Seg 		0.0 0.0 0 0.0 say:TPY_0350
(db=HMMPfam db_id=PF03118 from=242 to=303 evalue=1.5e-29 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 1.00e+00 say:TPY_0350
(db=HMMPfam db_id=PF01193 from=26 to=224 evalue=1.1e-25 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 1.00e+00 say:TPY_0350
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=242 to=310 evalue=1.1e-22) iprscan interpro
DB: Gene3D 		0.0 0.0 0 1.00e+00 say:TPY_0350
(db=HMMPfam db_id=PF01000 from=59 to=152 evalue=1.1e-19 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 1.00e+00 say:TPY_0350
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=50 to=170 evalue=3.8e-41 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		0.0 0.0 0 3.00e+00 say:TPY_0350
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=1 to=228 evalue=4.7e-32 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: superfamily 		0.0 0.0 0 4.00e+00 say:TPY_0350
no description (db=HMMSmart db_id=SM00662 from=20 to=227 evalue=4.6e-83 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMSmart 		0.0 0.0 0 4.00e+00 say:TPY_0350
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=245 to=311 evalue=5.5e-24 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: superfamily 		0.0 0.0 0 5.00e+00 say:TPY_0350
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=50 to=171 evalue=6.6e-46 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		0.0 0.0 0 6.00e+00 say:TPY_0350
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=20 to=313 evalue=6.1e-161 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		0.0 0.0 0 6.00e+00 say:TPY_0350
RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=1 to=313 evalue=36.502 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		0.0 0.0 0 3.60e+01 say:TPY_0350