Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA polymerase sigma-30 subunit SigH | rbh |
KEGG
DB: KEGG |
83.7 | 215.0 | 363 | 4.10e-98 | sap:Sulac_0254 |
RNA polymerase sigma-30 subunit SigH | similarity |
KEGG
DB: KEGG |
83.7 | 215.0 | 363 | 4.10e-98 | sap:Sulac_0254 |
RNA polymerase, sigma 30 subunit, SigH n=2 Tax=Sulfobacillus acidophilus RepID=G8TWX5_SULAD | similarity |
UNIREF
DB: UNIREF90 |
83.7 | null | 363 | 5.90e-98 | sap:Sulac_0254 |
Uncharacterized protein {ECO:0000313|EMBL:AEW03823.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob |
UNIPROT
DB: UniProtKB |
83.7 | 215.0 | 363 | 2.00e-97 | G8TWX5_SULAD | |
RNA polymerase, sigma 30 subunit, SigH n=2 Tax=Sulfobacillus acidophilus RepID=G8TWX5_SULAD (db=UNIREF evalue=5.0e-98 bit_score=363.2 identity=83.7 coverage=84.58498023715416) | similarity |
UNIREF
DB: UNIREF |
83.0 | 84.0 | 363 | 5.00e+00 | sap:Sulac_0254 |
SIGMA70_1 (db=PatternScan db_id=PS00715 from=89 to=102 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | sap:Sulac_0254 |
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=206 to=233 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | sap:Sulac_0254 |
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=181 to=235 evalue=0.00046 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 4.60e-04 | sap:Sulac_0254 |
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=60 to=238 evalue=1.2e-30 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_0254 |
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=170 to=235 evalue=1.2e-09 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_0254 |
(db=HMMPfam db_id=PF08281 from=199 to=234 evalue=1.8e-06 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_0254 |
spore_sigH: RNA polymerase sigma-H factor (db=HMMTigr db_id=TIGR02859 from=42 to=239 evalue=2.7e-133 interpro_id=IPR014218 interpro_description=RNA polymerase sigma-H type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO: | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_0254 |
no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=49 to=134 evalue=3.9e-06) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 3.00e+00 | sap:Sulac_0254 |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=47 to=135 evalue=3.8e-21 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | sap:Sulac_0254 |
(db=HMMPfam db_id=PF04542 from=65 to=134 evalue=4.0e-14 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 4.00e+00 | sap:Sulac_0254 |