| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| RNA polymerase sigma-70 subunit RpoD | similarity |
KEGG
DB: KEGG |
89.5 | 370.0 | 640 | 2.50e-181 | sap:Sulac_2913 |
| RNA polymerase sigma-70 subunit RpoD | rbh |
KEGG
DB: KEGG |
89.5 | 370.0 | 640 | 2.50e-181 | sap:Sulac_2913 |
| RNA polymerase sigma factor n=2 Tax=Sulfobacillus acidophilus RepID=F8I937_SULAT | similarity |
UNIREF
DB: UNIREF90 |
89.5 | null | 640 | 3.70e-181 | sap:Sulac_2913 |
| RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" |
UNIPROT
DB: UniProtKB |
89.5 | 370.0 | 640 | 1.30e-180 | F8I937_SULAT | |
| RNA polymerase sigma factor n=2 Tax=Sulfobacillus acidophilus RepID=F8I937_SULAT (db=UNIREF evalue=3.1e-181 bit_score=640.2 identity=89.5 coverage=99.19137466307278) | similarity |
UNIREF
DB: UNIREF |
89.0 | 99.0 | 640 | 3.00e+00 | sap:Sulac_2913 |
| coiled-coil (db=Coil db_id=coil from=123 to=144 evalue=NA) | iprscan |
interpro
DB: Coil |
0.0 | 0.0 | 0 | null | sap:Sulac_2913 |
| coiled-coil (db=Coil db_id=coil from=292 to=320 evalue=NA) | iprscan |
interpro
DB: Coil |
0.0 | 0.0 | 0 | null | sap:Sulac_2913 |
| seg (db=Seg db_id=seg from=282 to=293) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | sap:Sulac_2913 |
| SIGMA70_2 (db=PatternScan db_id=PS00716 from=330 to=356 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | sap:Sulac_2913 |
| SIGMA70_1 (db=PatternScan db_id=PS00715 from=161 to=174 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | sap:Sulac_2913 |
| seg (db=Seg db_id=seg from=61 to=81) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | sap:Sulac_2913 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=267 to=370 evalue=1.9e-29 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_2913 |
| (db=HMMPfam db_id=PF03979 from=12 to=82 evalue=1.0e-13 interpro_id=IPR007127 interpro_description=RNA polymerase sigma factor 70, region 1.1 GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_2913 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=291 to=369 evalue=1.2e-26 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_2913 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=98 to=207 evalue=1.8e-57 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_2913 |
| RpoD_Cterm: RNA polymerase sigma factor R (db=HMMTigr db_id=TIGR02393 from=133 to=370 evalue=2.3e-186 interpro_id=IPR012760 interpro_description=RNA polymerase sigma factor RpoD, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_2913 |
| (db=HMMPfam db_id=PF04539 from=216 to=292 evalue=2.3e-32 interpro_id=IPR007624 interpro_description=RNA polymerase sigma-70 region 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_2913 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=132 to=360 evalue=3.4e-32 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 3.00e+00 | sap:Sulac_2913 |
| (db=HMMPfam db_id=PF04545 from=305 to=358 evalue=3.6e-20 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | sap:Sulac_2913 |
| no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=113 to=206 evalue=3.2e-55) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 3.00e+00 | sap:Sulac_2913 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=309 to=321 evalue=6.2e-32 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 6.00e+00 | sap:Sulac_2913 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=330 to=345 evalue=6.2e-32 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 6.00e+00 | sap:Sulac_2913 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=345 to=356 evalue=6.2e-32 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 6.00e+00 | sap:Sulac_2913 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=185 to=193 evalue=6.2e-32 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 6.00e+00 | sap:Sulac_2913 |
| (db=HMMPfam db_id=PF00140 from=98 to=134 evalue=6.0e-21 interpro_id=IPR009042 interpro_description=RNA polymerase sigma-70 region 1.2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 6.00e+00 | sap:Sulac_2913 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=161 to=174 evalue=6.2e-32 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 6.00e+00 | sap:Sulac_2913 |
| (db=HMMPfam db_id=PF04542 from=137 to=207 evalue=7.9e-24 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 7.00e+00 | sap:Sulac_2913 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=210 to=284 evalue=7.0e-26 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 7.00e+00 | sap:Sulac_2913 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=210 to=261 evalue=9.6e-19 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 9.00e+00 | sap:Sulac_2913 |
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