Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA polymerase sigma-29 subunit SigE | rbh |
KEGG
DB: KEGG |
80.0 | 240.0 | 367 | 3.60e-99 | sap:Sulac_1448 |
RNA polymerase sigma-29 subunit SigE | similarity |
KEGG
DB: KEGG |
80.0 | 240.0 | 367 | 3.60e-99 | sap:Sulac_1448 |
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source=" |
UNIPROT
DB: UniProtKB |
80.0 | 240.0 | 367 | 1.80e-98 | G8TX37_SULAD | |
RNA polymerase sigma factor n=2 Tax=Sulfobacillus acidophilus RepID=F8IAV2_SULAT | similarity |
UNIREF
DB: UNIREF90 |
80.0 | null | 366 | 5.20e-99 | sap:Sulac_1448 |
RNA polymerase sigma factor n=2 Tax=Sulfobacillus acidophilus RepID=F8IAV2_SULAT (db=UNIREF evalue=4.5e-99 bit_score=366.7 identity=80.0 coverage=95.56451612903226) | similarity |
UNIREF
DB: UNIREF |
80.0 | 95.0 | 366 | 4.00e+00 | sap:Sulac_1448 |
SIGMA70_2 (db=PatternScan db_id=PS00716 from=213 to=239 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | sap:Sulac_1448 |
seg (db=Seg db_id=seg from=230 to=242) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | sap:Sulac_1448 |
SIGMA70_1 (db=PatternScan db_id=PS00715 from=94 to=107 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | sap:Sulac_1448 |
(db=HMMPfam db_id=PF04545 from=188 to=241 evalue=1.1e-16 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_1448 |
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=150 to=245 evalue=1.7e-21 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | sap:Sulac_1448 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=213 to=228 evalue=2.7e-11 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_1448 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=192 to=204 evalue=2.7e-11 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_1448 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=94 to=107 evalue=2.7e-11 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_1448 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=228 to=239 evalue=2.7e-11 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_1448 |
spore_sigmaE: RNA polymerase sigma-E fac (db=HMMTigr db_id=TIGR02835 from=14 to=247 evalue=2.7e-146 interpro_id=IPR014200 interpro_description=RNA polymerase sigma-E type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_1448 |
(db=HMMPfam db_id=PF04542 from=70 to=140 evalue=2.8e-17 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | sap:Sulac_1448 |
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=174 to=241 evalue=3.2e-13 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 3.00e+00 | sap:Sulac_1448 |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=33 to=140 evalue=3.1e-31 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | sap:Sulac_1448 |
RNA polymerase sporulation-specific sigma factor, SigK/SigE types (db=HMMPIR db_id=PIRSF000770 from=1 to=247 evalue=4.4e-81 interpro_id=IPR016263 interpro_description=RNA polymerase sporulation-specific sigma factor, SigK/SigE GO=Molecular Function: DNA binding (GO:0003677), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: sigma factor activity (GO:0016987), Biological Process: sporulation resulting in formation of a cellular spore (GO:0030435)) | iprscan |
interpro
DB: HMMPIR |
0.0 | 0.0 | 0 | 4.00e+00 | sap:Sulac_1448 |
sigma70-ECF: RNA polymerase sigma factor (db=HMMTigr db_id=TIGR02937 from=65 to=243 evalue=6.4e-31 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 6.00e+00 | sap:Sulac_1448 |
no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=47 to=139 evalue=7.5e-26) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 7.00e+00 | sap:Sulac_1448 |