| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| sigB; sporulation sigma factor SigF |
KEGG
DB: KEGG |
70.2 | 191.0 | 266 | 5.30e-69 | say:TPY_1584 | |
| RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source= |
UNIPROT
DB: UniProtKB |
70.2 | 191.0 | 266 | 2.60e-68 | F8I5B8_SULAT | |
| RNA polymerase sigma factor n=2 Tax=Sulfobacillus acidophilus RepID=F8I5B8_SULAT (db=UNIREF evalue=6.6e-69 bit_score=266.2 identity=70.2 coverage=95.47738693467338) | similarity |
UNIREF
DB: UNIREF |
70.0 | 95.0 | 266 | 6.00e+00 | say:TPY_1584 |
| SIGMA70_2 (db=PatternScan db_id=PS00716 from=154 to=180 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | say:TPY_1584 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=119 to=181 evalue=1.5e-05 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 1.00e+00 | say:TPY_1584 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=37 to=93 evalue=1.1e-11 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 1.00e+00 | say:TPY_1584 |
| no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=1 to=36 evalue=2.2e-12) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 2.00e+00 | say:TPY_1584 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=16 to=184 evalue=3.9e-05 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 3.00e+00 | say:TPY_1584 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=42 to=118 evalue=3.6e-16 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Functi | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | say:TPY_1584 |
| (db=HMMPfam db_id=PF04545 from=133 to=181 evalue=3.2e-15 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | say:TPY_1584 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=1 to=40 evalue=5.5e-15 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 5.00e+00 | say:TPY_1584 |
| (db=HMMPfam db_id=PF04539 from=49 to=121 evalue=6.3e-16 interpro_id=IPR007624 interpro_description=RNA polymerase sigma-70 region 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 6.00e+00 | say:TPY_1584 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=101 to=186 evalue=6.8e-15 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 6.00e+00 | say:TPY_1584 |
| (db=HMMPfam db_id=PF04542 from=1 to=37 evalue=8.4e-07 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 8.00e+00 | say:TPY_1584 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=18 to=26 evalue=9.2e-07 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 9.00e+00 | say:TPY_1584 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=154 to=169 evalue=9.2e-07 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 9.00e+00 | say:TPY_1584 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=169 to=180 evalue=9.2e-07 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 9.00e+00 | say:TPY_1584 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=137 to=149 evalue=9.2e-07 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 9.00e+00 | say:TPY_1584 |
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