ggKbase home page

AMDSBA2_393_1 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
cspA; cold-shock DNA-binding domain-containing protein KEGG
DB: KEGG
95.8 48.0 98 4.70e-19 say:TPY_0822
Uncharacterized protein {ECO:0000313|EMBL:AEW06280.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob UNIPROT
DB: UniProtKB
95.8 48.0 98 2.30e-18 G8TYL9_SULAD
Cold-shock DNA-binding domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9U5_SULAT (db=UNIREF evalue=5.8e-19 bit_score=98.2 identity=95.8 coverage=95.91836734693877) similarity UNIREF
DB: UNIREF
95.0 95.0 98 5.00e+00 say:TPY_0822
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=1 to=46 evalue=1.2e-20) iprscan interpro
DB: HMMPanther
0.0 0.0 0 1.00e+00 say:TPY_0822
no description (db=HMMSmart db_id=SM00357 from=1 to=48 evalue=1.1e-09 interpro_id=IPR011129 interpro_description=Cold shock protein GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.00e+00 say:TPY_0822
COLDSHOCK (db=FPrintScan db_id=PR00050 from=6 to=15 evalue=1.6e-10 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 say:TPY_0822
COLDSHOCK (db=FPrintScan db_id=PR00050 from=21 to=39 evalue=1.6e-10 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 say:TPY_0822
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=3 to=48 evalue=1.4e-12 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 say:TPY_0822
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=48 evalue=2.1e-10 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
0.0 0.0 0 2.00e+00 say:TPY_0822
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=48 evalue=3.3e-12 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMPIR
0.0 0.0 0 3.00e+00 say:TPY_0822
(db=HMMPfam db_id=PF00313 from=2 to=47 evalue=8.6e-20 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 8.00e+00 say:TPY_0822