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SCNpilot_BF_INOC_scaffold_1617_curated_14

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 16417..16965

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 179.0
  • Bit_score: 128
  • Evalue 6.00e-27
2'-5' RNA ligase (EC:6.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 179.0
  • Bit_score: 112
  • Evalue 9.00e-23
2'-5' RNA ligase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIB1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 179.0
  • Bit_score: 128
  • Evalue 4.30e-27

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 549
TTGAGGTTATTTATCGCACTTGTCTTTGAGCAATCGATGGAAAAATTAATTGGCTTGATCCATCAAGTCAAACAAAACAGCACAAAGGGAAGCTTTACAAGACAGGAAAATCTTCATGTAACCCTTGCTTTTCTGGGAGAAACAAATGCCGAAAAAATTGATCTGATCAAGGCATGTATGGACACATCCTGCCTGAGTGATCCTTTGATTCTCACTGTGAAGGGCATTGACAGGTTTCATAGTGTAACGGGCGATCTCGTCTTTGCGTCTGTGAACCCCAGCAAGGATTTACTGGATTTACAAATATGTCTGGAAAGCGAATTGAGAAAATCGGGTTTTCCTCTGGAGCAGAGGACGTTTCGGCCCCATATCACATTGGGGCGCAACGTGGTTTTTTCCGAAAGCTTTGACAAAGCCAAGACCAAAATGGAATTTGAGGAACTAAACGAGCGGATAGAAAAGCTTGTTTTGATGAAAAGTGAAAGAATCGGCGGTAAACTGACCTACACGCCTGTTTATGAAGCGAAATTGAGGGATATGACAGCATGA
PROTEIN sequence
Length: 183
LRLFIALVFEQSMEKLIGLIHQVKQNSTKGSFTRQENLHVTLAFLGETNAEKIDLIKACMDTSCLSDPLILTVKGIDRFHSVTGDLVFASVNPSKDLLDLQICLESELRKSGFPLEQRTFRPHITLGRNVVFSESFDKAKTKMEFEELNERIEKLVLMKSERIGGKLTYTPVYEAKLRDMTA*