ggKbase home page

SCNpilot_BF_INOC_scaffold_1738_curated_6

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 2599..2919

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MIK8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 98.0
  • Bit_score: 167
  • Evalue 3.70e-39
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 98.0
  • Bit_score: 167
  • Evalue 5.20e-39
SSU ribosomal protein S13P similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 98.0
  • Bit_score: 160
  • Evalue 1.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eubacterium sp. CAG:180 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 321
ATGGCGCGTATAGCGGGTGTAGACTTACCGAGAGATAAAAGAATAGAGTTCGGACTGACCTATATCTATGGTACCGGCCGCAAGACTGCAAGTGAAATACTTTCTTCAACAGGTGTAAATCCCGACACGAGAGTGAAGGATTTATCAGAAGAAGATGTTTCAAAGATGCGTGATTATATTGACAAGAATGTTCAGGTGGAAGGCGATCTTCGCCGTAACATCGCATTTGACATCAAGAGATTAATCGAAATCGGCAGTTATCGCGGAGTACGTCACCGTAAGAACCTTCCTGTCANNNNNNNNNNNNNNNNNNNNNNNTAA
PROTEIN sequence
Length: 107
MARIAGVDLPRDKRIEFGLTYIYGTGRKTASEILSSTGVNPDTRVKDLSEEDVSKMRDYIDKNVQVEGDLRRNIAFDIKRLIEIGSYRGVRHRKNLPVXXXXXXXX*