ggKbase home page

SCNpilot_BF_INOC_scaffold_4688_curated_12

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(7538..8107)

Top 3 Functional Annotations

Value Algorithm Source
Dockerin type I repeat protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K9Z1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 29.9
  • Coverage: 194.0
  • Bit_score: 80
  • Evalue 1.40e-12
Dockerin type I repeat protein {ECO:0000313|EMBL:CCY61859.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.9
  • Coverage: 194.0
  • Bit_score: 80
  • Evalue 2.00e-12
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase similarity KEGG
DB: KEGG
  • Identity: 27.9
  • Coverage: 197.0
  • Bit_score: 73
  • Evalue 4.80e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:264 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 570
TCATCAACCACCTCCACCAGCACGACGACGTCTACTTCCACAAGCACTTCCACCAGCACGACGACGTCTACTTCCACAAGCACTTCCACCAGCACATCAACATCAACCTCCTCCACGACTCCCACATCCATCTTATCGGATCCGCTTTTTGTCAGCCCGTTTATAACAGACAGCAATTATTTATGGGGAATTGATTCTCGCTACAATACCGTGGAACAATTCATTGGCGGATTTGCGTCAGCCTGGCACATCAGCGTTGAAGTATATCGCGATGAGAAACAGTTGACCACCGGGAAAATGGGCACCGGTCTTACCGTGCGCATCAAACTGAACAGTGCGGTGGCGGAGCAATATACAACGGTGGTATACGGCGATATTGACGGCACTGGTAAAATAGACGCAATTGATATTGTATATGCCAAAAAGCATGTTTTAAAAATTTCACTGCTAAAAGATGTGAAATTAATGGCAGCCAACGCCGACCGAAGCACAGACAATAAGGTCAATGCCATTGACATCCTCAAATTGAAGCAAGAAGTTCTGAAAATCAAACAAATCAAACAAAACTAA
PROTEIN sequence
Length: 190
SSTTSTSTTTSTSTSTSTSTTTSTSTSTSTSTSTSTSSTTPTSILSDPLFVSPFITDSNYLWGIDSRYNTVEQFIGGFASAWHISVEVYRDEKQLTTGKMGTGLTVRIKLNSAVAEQYTTVVYGDIDGTGKIDAIDIVYAKKHVLKISLLKDVKLMAANADRSTDNKVNAIDILKLKQEVLKIKQIKQN*