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SCNpilot_BF_INOC_scaffold_23800_curated_1

Organism: scnpilot_dereplicated_Acinetobacter_3

partial RP 39 / 55 MC: 5 BSCG 40 / 51 MC: 7 ASCG 7 / 38 MC: 3
Location: 1898..2230

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1217694 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. CIP 64.2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 111.0
  • Bit_score: 218
  • Evalue 2.70e-54
DNA-directed RNA polymerase subunit beta' n=2 Tax=Acinetobacter beijerinckii RepID=N9FGH1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 111.0
  • Bit_score: 218
  • Evalue 1.90e-54
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 111.0
  • Bit_score: 218
  • Evalue 5.50e-55

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Taxonomy

Acinetobacter sp. CIP 64.2 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
TTGGTATCTGTTTCACGTTCAGGTGAAATTGGTATTGCGGATGACTTAGGCCGTGAGCGTGAGCGTTATAAACTTCCTTATGGTGCAAGCATCTTGTTGAAAGATGGTGAAGCTGTAGAAGCTGGCGGTATCGTAGCGACTTGGGATCCACATACACATCCATTGGTAACAGAAGTTGCTGGTAAAGCGCGTTTCAGCCAGATCGCTGATGGCGTAACTGCAACATCGAAAACTGATGATGCAACGGGTATGACCACTGTTGAAATCTTGCCTGTAACAGCTCGTCCTGCTTCTGGTAAAGATTTACGTCCTGCAATCGTGTTGGATACAACC
PROTEIN sequence
Length: 111
LVSVSRSGEIGIADDLGRERERYKLPYGASILLKDGEAVEAGGIVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLRPAIVLDTT