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SCNpilot_BF_INOC_scaffold_28084_curated_1

Organism: scnpilot_dereplicated_Acinetobacter_3

partial RP 39 / 55 MC: 5 BSCG 40 / 51 MC: 7 ASCG 7 / 38 MC: 3
Location: comp(1..234)

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide biosynthesis protein n=1 Tax=Pseudomonas fragi RepID=UPI00028A040A similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 76.0
  • Bit_score: 112
  • Evalue 1.40e-22
O-antigen transporter {ECO:0000313|EMBL:EMI04820.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 76.0
  • Bit_score: 112
  • Evalue 1.90e-22
O-antigen transporter similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 76.0
  • Bit_score: 109
  • Evalue 4.30e-22

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Taxonomy

Pseudomonas sp. Lz4W → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
TTGTCTAAACTCAAAATAAACATCTTGGCAAGTTATATTAGCCAAATTTATATTATTCTTATTAGTCTTATTATCCTACCTCTTTATATGAAATATATGGGGGCAGAGGCGTATGGCTTAGTTGGCTTTTTTACTATGTTGCAAGGCCTGTTTATGCTACTTGATTTTGGTTTGACTCCAACAATCAGTAGACAAACAGCCCAATACAATGCGGGGGCTTCAACTGCTTTAGCT
PROTEIN sequence
Length: 78
LSKLKINILASYISQIYIILISLIILPLYMKYMGAEAYGLVGFFTMLQGLFMLLDFGLTPTISRQTAQYNAGASTALA