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ACD5_30_9

Organism: ACD5

megabin RP 49 / 55 MC: 26 BSCG 49 / 51 MC: 19 ASCG 0 / 38
Location: comp(9947..10540)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 179.0
  • Bit_score: 176
  • Evalue 7.20e-42
coiled-coil (db=Coil db_id=coil from=119 to=140 evalue=NA) iprscan interpro
DB: Coil
  • Identity: null
  • Coverage: null
  • Bit_score: null
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=29 to=192 evalue=1.2e-41 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-41

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 594
ATGCATCAAGGCAATGATATAAAATTGAATAAGTTTGGGGACATGACCGATGAACAATTGGTCATGGAAACTCTTAAGAATCCAGAAGTCTACGCTTTGATTGTTGAAAGGTATGAAGAAAAGCTTCTGCGCTACATCATGAGAATTTCAGCAGGATCAAGAGAGGATGCGGAAGACACTTTGCAAGATGTTTTTTTAAGCGCTTATAAAAATCTTAACGATTTTGATACCGACTTAAAATTCTCTTCTTGGATTTATCGCATAGCTCATAATAAAGTGATTAGTCATTTTAGGAAAGTCACAGCTCGCCCTAAAACCACAACTTATGAAGGAGACACGCAACTGCTCAATATTTTAGCTAGTGAAGAAAATATTGCACGAAATTTAGAAAAAAAATATAATTCAGAACAGGTACGTGAAACAATAGATCAGCTTGATCCAAGATATAAGGAGGTGTTGGTGCTTAAATTTTTGGAAGAAAAGGATTATAAAGAGATTTCAGACATTTTGCAAAAGCCCATGGGCACAGTTGCGACACTTATAAACAGGGCAAAGAAGCAATTTAAGGAGAAAACAGAGAAGTTGGTTAAGTAA
PROTEIN sequence
Length: 198
MHQGNDIKLNKFGDMTDEQLVMETLKNPEVYALIVERYEEKLLRYIMRISAGSREDAEDTLQDVFLSAYKNLNDFDTDLKFSSWIYRIAHNKVISHFRKVTARPKTTTYEGDTQLLNILASEENIARNLEKKYNSEQVRETIDQLDPRYKEVLVLKFLEEKDYKEISDILQKPMGTVATLINRAKKQFKEKTEKLVK*