Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
smpB; ssrA RNA (tmRNA)-binding protein | similarity |
KEGG
DB: KEGG |
55.4 | 148.0 | 161 | 1.40e-37 | ddf:DEFDS_1882 |
SSRP (db=PatternScan db_id=PS01317 from=22 to=34 evalue=0.0 interpro_id=IPR020081 interpro_description=SsrA-binding protein, conserved site) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | ddf:DEFDS_1882 |
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=3 to=146 evalue=5.7e-68 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 5.70e-68 | ddf:DEFDS_1882 |
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=1 to=128 evalue=7.5e-43 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: superfamily |
null | null | null | 7.50e-43 | ddf:DEFDS_1882 |
no description (db=Gene3D db_id=G3DSA:2.40.280.10 from=3 to=125 evalue=3.7e-38 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 3.70e-38 | ddf:DEFDS_1882 |
Q3C560_9CLOT_Q3C560; (db=BlastProDom db_id=PD004488 from=5 to=128 evalue=1.0e-30 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: BlastProDom |
null | null | null | 1.00e-30 | ddf:DEFDS_1882 |
SmpB (db=HMMPfam db_id=PF01668 from=3 to=67 evalue=1.3e-25 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.30e-25 | ddf:DEFDS_1882 |
SmpB (db=HAMAP db_id=MF_00023 from=2 to=147 evalue=26.331 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.63e+01 | ddf:DEFDS_1882 |
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 148.0 | 290 | 1.70e-75 | K2GQ00_9BACT | |
smpB; SsrA RNA (tmRNA)-binding protein; K03664 SsrA-binding protein alias=ACD5_C00051G00002,ACD5_40991.17750.10G0002,ACD5_40991.17750.10_2 id=88548 tax=ACD5 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 289 | 4.90e-76 | ddf:DEFDS_1882 |