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ACD5_51_5 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
57.9 114.0 129 8.60e-28 pfn:HZ99_07300
RIBOSOMAL_L20 (db=PatternScan db_id=PS00937 from=69 to=85 evalue=0.0 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: PatternScan
null null null 0.0 pfn:HZ99_07300
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=16 to=129 evalue=1.7e-41 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
null null null 1.70e-41 pfn:HZ99_07300
Ribosomal_L20 (db=HMMPfam db_id=PF00453 from=17 to=123 evalue=4.0e-36 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPfam
null null null 4.00e-36 pfn:HZ99_07300
RIBOSOMALL20 (db=FPrintScan db_id=PR00062 from=90 to=116 evalue=4.7e-30 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: FPrintScan
null null null 4.70e-30 pfn:HZ99_07300
RIBOSOMALL20 (db=FPrintScan db_id=PR00062 from=27 to=56 evalue=4.7e-30 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: FPrintScan
null null null 4.70e-30 pfn:HZ99_07300
RIBOSOMALL20 (db=FPrintScan db_id=PR00062 from=57 to=86 evalue=4.7e-30 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: FPrintScan
null null null 4.70e-30 pfn:HZ99_07300
50S RIBOSOMAL PROTEIN L20 (db=HMMPanther db_id=PTHR10986 from=11 to=129 evalue=3.5e-29 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPanther
null null null 3.50e-29 pfn:HZ99_07300
Ribosomal protein L20 (db=superfamily db_id=SSF74731 from=76 to=129 evalue=8.4e-17) iprscan interpro
DB: superfamily
null null null 8.40e-17 pfn:HZ99_07300
Q3FTN9_9BURK_Q3FTN9; (db=BlastProDom db_id=PD002389 from=35 to=86 evalue=8.0e-11) iprscan interpro
DB: BlastProDom
null null null 8.00e-11 pfn:HZ99_07300
Ribosomal_L20 (db=HAMAP db_id=MF_00382 from=17 to=129 evalue=23.054 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HAMAP
null null null 2.31e+01 pfn:HZ99_07300
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 alias=ACD5_C00051G00005,ACD5_40991.17750.10G0005,ACD5_40991.17750.10_5 id=88550 tax=ACD5 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90
100.0 null 253 3.40e-65 pfn:HZ99_07300
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
99.2 129.0 252 3.40e-64 K2FR21_9BACT
  • SCG Annotations
  • BSCG ribosomal protein L20