Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
nusG; Transcription antiterminator NusG | similarity |
KEGG
DB: KEGG |
58.6 | 174.0 | 211 | 1.80e-52 | dpb:BABL1_474 |
Transcription antitermination protein nusG n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DW36_EIKCO (db=UNIREF evalue=6.0e-33 bit_score=143.0 identity=43.26 coverage=98.2758620689655) | similarity |
UNIREF
DB: UNIREF |
43.26 | 98.28 | 143 | 6.00e-33 | dpb:BABL1_474 |
NUSG (db=PatternScan db_id=PS01014 from=157 to=166 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | dpb:BABL1_474 |
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=4 to=173 evalue=7.2e-43 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 7.20e-43 | dpb:BABL1_474 |
no description (db=HMMSmart db_id=SM00738 from=1 to=107 evalue=4.7e-26 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.70e-26 | dpb:BABL1_474 |
N-utilization substance G protein NusG, N-terminal domain (db=superfamily db_id=SSF82679 from=1 to=109 evalue=2.4e-23 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.40e-23 | dpb:BABL1_474 |
no description (db=Gene3D db_id=G3DSA:3.30.70.940 from=2 to=108 evalue=1.3e-22 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.30e-22 | dpb:BABL1_474 |
NUSGTNSCPFCT (db=FPrintScan db_id=PR00338 from=55 to=67 evalue=5.4e-18 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.40e-18 | dpb:BABL1_474 |
NUSGTNSCPFCT (db=FPrintScan db_id=PR00338 from=132 to=147 evalue=5.4e-18 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.40e-18 | dpb:BABL1_474 |
NUSGTNSCPFCT (db=FPrintScan db_id=PR00338 from=150 to=166 evalue=5.4e-18 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.40e-18 | dpb:BABL1_474 |
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=117 to=173 evalue=9.9e-16 interpro_id=IPR008991 interpro_description=Translation protein SH3-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 9.90e-16 | dpb:BABL1_474 |
NusG (db=HMMPfam db_id=PF02357 from=2 to=97 evalue=3.4e-15 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.40e-15 | dpb:BABL1_474 |
no description (db=Gene3D db_id=G3DSA:2.30.30.30 from=112 to=173 evalue=8.7e-14 interpro_id=IPR014722 interpro_description=Translation protein SH3-like, subgroup) | iprscan |
interpro
DB: Gene3D |
null | null | null | 8.70e-14 | dpb:BABL1_474 |
no description (db=HMMSmart db_id=SM00739 from=120 to=147 evalue=0.0019 interpro_id=IPR005824 interpro_description=KOW) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.90e-03 | dpb:BABL1_474 |
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bact |
UNIPROT
DB: UniProtKB |
100.0 | 173.0 | 342 | 3.30e-91 | K2F3K9_9BACT |