Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
cold-shock DNA-binding domain-containing protein | similarity |
KEGG
DB: KEGG |
69.1 | 68.0 | 108 | 6.50e-22 | psy:PCNPT3_09180 |
COLD_SHOCK (db=PatternScan db_id=PS00352 from=18 to=36 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | psy:PCNPT3_09180 |
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=1 to=67 evalue=4.5e-33) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 4.50e-33 | psy:PCNPT3_09180 |
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=4 to=69 evalue=2.9e-32 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 2.90e-32 | psy:PCNPT3_09180 |
CSD (db=HMMPfam db_id=PF00313 from=5 to=67 evalue=1.9e-29 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.90e-29 | psy:PCNPT3_09180 |
no description (db=HMMSmart db_id=SM00357 from=6 to=69 evalue=1.5e-28 interpro_id=IPR011129 interpro_description=Cold shock protein GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.50e-28 | psy:PCNPT3_09180 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=68 evalue=7.1e-25 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 7.10e-25 | psy:PCNPT3_09180 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=4 to=69 evalue=1.4e-21 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.40e-21 | psy:PCNPT3_09180 |
COLDSHOCK (db=FPrintScan db_id=PR00050 from=42 to=60 evalue=5.3e-18 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.30e-18 | psy:PCNPT3_09180 |
COLDSHOCK (db=FPrintScan db_id=PR00050 from=27 to=36 evalue=5.3e-18 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.30e-18 | psy:PCNPT3_09180 |
COLDSHOCK (db=FPrintScan db_id=PR00050 from=7 to=22 evalue=5.3e-18 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 5.30e-18 | psy:PCNPT3_09180 |
Uncharacterized protein {ECO:0000313|EMBL:EKD53811.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 69.0 | 142 | 2.60e-31 | K1ZXF9_9BACT | |
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) alias=ACD5_73742.2592.4_2,ACD5_73742.2592.4G0002,ACD5_C00139G00002 id=89068 tax=ACD5 species=Pseudomonas mendocina genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
75.8 | null | 109 | 5.60e-22 | psy:PCNPT3_09180 |