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ACD60_47_8 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) rbh KEGG
DB: KEGG 		72.1 330.0 457 2.70e-126 pdr:H681_02900
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG 		72.1 330.0 457 2.70e-126 pdr:H681_02900
DNA-directed RNA polymerase subunit alpha n=21 Tax=Pseudomonadaceae RepID=RPOA_PSE14 (db=UNIREF evalue=5.0e-123 bit_score=444.0 identity=71.52 coverage=99.0881458966565) similarity UNIREF
DB: UNIREF 		71.52 99.09 444 5.00e-123 pdr:H681_02900
seg (db=Seg db_id=seg from=307 to=318) iprscan interpro
DB: Seg 		null null null null pdr:H681_02900
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=23 to=317 evalue=9.2e-142 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 9.20e-142 pdr:H681_02900
no description (db=HMMSmart db_id=SM00662 from=23 to=234 evalue=1.6e-89 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart 		null null null 1.60e-89 pdr:H681_02900
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=53 to=178 evalue=3.0e-43 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		null null null 3.00e-43 pdr:H681_02900
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=53 to=177 evalue=8.4e-39 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		null null null 8.40e-39 pdr:H681_02900
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=4 to=235 evalue=1.5e-30 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 1.50e-30 pdr:H681_02900
RNA_pol_A_bac (db=HMMPfam db_id=PF01000 from=64 to=155 evalue=6.1e-26 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 6.10e-26 pdr:H681_02900
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=249 to=328 evalue=3.8e-25 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 3.80e-25 pdr:H681_02900
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=246 to=327 evalue=1.8e-24) iprscan interpro
DB: Gene3D 		null null null 1.80e-24 pdr:H681_02900
RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=250 to=308 evalue=2.6e-24 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 2.60e-24 pdr:H681_02900
Q3K612_PSEFL_Q3K612; (db=BlastProDom db_id=PD001179 from=256 to=328 evalue=3.0e-23 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: BlastProDom 		null null null 3.00e-23 pdr:H681_02900
RNA_pol_L (db=HMMPfam db_id=PF01193 from=28 to=232 evalue=7.7e-22 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 7.70e-22 pdr:H681_02900
RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=5 to=317 evalue=34.237 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		null null null 3.42e+01 pdr:H681_02900
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase UNIPROT
DB: UniProtKB 		100.0 328.0 640 1.10e-180 K2AEN3_9BACT
DNA-directed RNA polymerase subunit alpha n=142 Tax=Pseudomonadaceae RepID=RPOA_PSE14 similarity UNIREF
DB: UNIREF90 		71.5 null 452 1.30e-124 pdr:H681_02900