ggKbase home page

13_1_20cm_full_scaffold_103_10

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(10300..11505)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 405.0
  • Bit_score: 554
  • Evalue 9.00e-155
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 384.0
  • Bit_score: 630
  • Evalue 1.80e-177
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 401.0
  • Bit_score: 561
  • Evalue 1.60e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCCGGTCTTCCAGTACACCGCGCGCACGCTCAAAGGCGATCTCGTCAACGACAAGATCGACCTGCCGACGCGCGACGACGTCATCGCGCACCTGCGGAAGAACCGCATGGTCGTCGTACAGGTGCGCGCGGCGCCCAAGGAGTTCAAGCTCAGCTTCAAGTTCGGCAGCGGCGTCAAGACTCGCGACGTCGTCGTGTTCACGCGCCAGTTCGCCACGATGATCAACGCGGGCCTGCCGCTGGTGCAGGCCCTCGACATCCTGGCGCAGCAGACCGAGAACAAGATCCTGGCCGACGTCACCCGTCAGGTGGTGTATGACGTCGAGAGCGGCCAGACCCTCGCCGACGCGCTGCGCAAGCACCCCAAGGCGTACAGCGACCTGTACGTCAACATGGTGGCGGCGGGTGAGGCCGGGGGTATTCTCGACACCATCCTCGTGCGTCTCGCCGAGTTCCTCGAGAAGAACGACGCGATCGTGCGCAAGGTCAAAGGCGCGATGATCTACCCCGGCGTCATCATGTCGGTGGCGGTCATCGCGATCTCCGTGCTGCTCATCTTCGTGATCCCGACCTTCCAAAACATGTTCGCGTCCGTCAACCTGCAGCTGCCGCTCCCGACCCGCATAGTGATCGGCGCGAGCAATGTGCTCAAGCAGTACTGGTGGGCCATCATCGGGGCTATCGGGGCGGGCGTGTTCGGCTTGAATCGCTATTACCAGACCGCGCCGGGGCGGCTGCAGATCGATACGCTGCTGCTCAAGCTGCCGGTGCTGGGCGACGTGCTCCGCAAGTCGGCGGTGTCGCGGTTCACGCGCACGCTCGGCACCCTCATCTCTTCCGGCGTGTCGATTCTCGACGGCCTCGAAATCACGGCGCGCACCGCCGGGAACATGGTGATTCACAACGCGGTCATGGCGTCCCGCGCCTCGATCGCCGGCGGCGAGACCATCGCCGCGCCGCTGGCCAAGTCGAAGGTGTTCCCCCCGATGGTCATCTCGATGATCTCGGTGGGTGAGCAGACCGGGGGCATGGACGAGATGCTCTCGAAGATCGCCGACTTCTACGACGACGAGGTGGACGCGGCGGTCAGCGCGCTGCTCTCGCTCATGGAGCCGATCATGATCGTGGTGCTCGGCGTGATCGTGGGCGGCATGGTCATCGCGATGTATCTCCCGATCTTCGATATGGTGAACGCGGTGCAGTAG
PROTEIN sequence
Length: 402
MPVFQYTARTLKGDLVNDKIDLPTRDDVIAHLRKNRMVVVQVRAAPKEFKLSFKFGSGVKTRDVVVFTRQFATMINAGLPLVQALDILAQQTENKILADVTRQVVYDVESGQTLADALRKHPKAYSDLYVNMVAAGEAGGILDTILVRLAEFLEKNDAIVRKVKGAMIYPGVIMSVAVIAISVLLIFVIPTFQNMFASVNLQLPLPTRIVIGASNVLKQYWWAIIGAIGAGVFGLNRYYQTAPGRLQIDTLLLKLPVLGDVLRKSAVSRFTRTLGTLISSGVSILDGLEITARTAGNMVIHNAVMASRASIAGGETIAAPLAKSKVFPPMVISMISVGEQTGGMDEMLSKIADFYDDEVDAAVSALLSLMEPIMIVVLGVIVGGMVIAMYLPIFDMVNAVQ*