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13_1_20cm_full_scaffold_124_9

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 8702..9352

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6Q4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 210.0
  • Bit_score: 217
  • Evalue 1.40e-53
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aer similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 212.0
  • Bit_score: 217
  • Evalue 1.50e-53
RNA polymerase sigma-37 subunit RpsB/SigB similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 212.0
  • Bit_score: 215
  • Evalue 2.00e-53

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Taxonomy

Collinsella aerofaciens → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 651
GTGGTCTTCCTAGCCAGGAAATTCAGCAACCGGGGCGAGCCGCTCGAGGACATCGTCCAGGTCGGGTATATCGGCCTGCTTCAGGCGATCGAGCGATTCGAACCGCAGCGCGGTCTGGAATTCTCGACCTTCGCCACCCCCACGATCGTGGGGGAAATCAAGCGCTACTTCCGTGACAAGAGCTGGGCCATCAAGGTCCCGCGCCGGCTGCAGGAAACGATGCAACGTGCCGACCTGGCGCAGCAGCGCCTGCAGGCCAAGCTCGGGCGAACCCCATCGGTCAACGAAATCGCGAAGGAGCTGGACCTGGCCCCGGAAGAAGTTCTGGCGGCGATGGAGGCGAGCCCGGCGCAGCGCACCATTCCCTTCGAATCGACCGGGCCGGCGCCCAGGGACGACGACGGGCTGCAGCTGACCGAACGGCTAGGGCTGGAGGATGAAAACCTCGACAAGGTCGAGTTGCAGGACCTGCTCGACCAGGCCATGCGACACCTGACGCCGCGGGAGCGACGGATCATGTACCTGCGTTTCGTCGACGAGCTGCCCCAGGCGGAGGTCGCCAAGCGGCTCGGCATCTCCCAGATGCACGTCTCGCGCCTGCAGCGCGCCGCGGTCGAGCGCCTGAAGCGCGAGCTACCGGTTTCGACCTAA
PROTEIN sequence
Length: 217
VVFLARKFSNRGEPLEDIVQVGYIGLLQAIERFEPQRGLEFSTFATPTIVGEIKRYFRDKSWAIKVPRRLQETMQRADLAQQRLQAKLGRTPSVNEIAKELDLAPEEVLAAMEASPAQRTIPFESTGPAPRDDDGLQLTERLGLEDENLDKVELQDLLDQAMRHLTPRERRIMYLRFVDELPQAEVAKRLGISQMHVSRLQRAAVERLKRELPVST*