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13_1_20cm_full_scaffold_2170_17

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 16957..17928

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002D58C6A similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 333.0
  • Bit_score: 309
  • Evalue 4.10e-81
RpoD family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 303.0
  • Bit_score: 389
  • Evalue 4.40e-105
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 307.0
  • Bit_score: 309
  • Evalue 1.20e-81

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGGAGCAGCGGCCGCTCCCGCATCTTCCACTCGAATCCGCTGTCGATGCAGAGCCGCGGCTCGAGCTTCTGCCCGACTCGGCGGACGCGGAGGAACCCGAAACCGACGACGACGACGGGGACGACACACCCGCCGCGGCGAAGGCGGAGCCGACGCAGGACCCGCTCAAACTCTATGTCCGCGCGATCGGCGACGGCCCGCTTCTGACCCCCCCGGAGGAGCGTGAGCTCGCGCGGCGCAAGGACGAGGGCGACGAATGGGCCAAGAAGAAGCTGATCGAGTCGAACCTCCGCCTCGTCATGTCGATCACGCGGAATTACACGAAGGCGGGCGTGCCTCTCCTCGACCTCATCCAGGAGGGGAACCTCGGGCTCATCCGCGCCGTGGAGAAGTTCGACTACAAGATGGGGTACAAGCTTTCGACCTACGCCACTTGGTGGATCCGGCAGGCCGTGACGCGTGCGCTCGCCGACCAGGGCCGCACGATCCGCCTTCCGGTGCACGTCGCCGACCAGGTCCGGCGACTCATGCGGGCACGCCGCCAACTCGCGCAAAAGCTGAACCGTGAGCCGACTGCGGAGGAGCTGGCGAAGGAGAGCGGCTTCACCGAACAGCGTGTGCAGGAGCTCCTCGACCTGGTCGAGGATCCCGTCTCGCTCGAGACGCCGGTCGGCGACGGCGAGTCGATGTACGCCGATCTGATCGAGGATGTGAATTCCGACCGACCCGACGAGACCACCGCGGAAAAGCTCCGCCGCAAAGAGCTCGCAGAGGCGTTGCTACGGCTGAACCCGCGCATGCAACGCGTGCTCGCGCTGCGCTTCGGCCTCGACGGTGAATCTCCGCAGACGCTCGAAGAGGTCGGTGCGGGCCTCGGAATCACGCGCGAGCGCGTGCGCCAGCTCGAATCTCGCGCGTTGCGCGAACTGCGCACCGTGGCGCCGGATCTCGAGCTGTACCTTCGGACCTAG
PROTEIN sequence
Length: 324
MEQRPLPHLPLESAVDAEPRLELLPDSADAEEPETDDDDGDDTPAAAKAEPTQDPLKLYVRAIGDGPLLTPPEERELARRKDEGDEWAKKKLIESNLRLVMSITRNYTKAGVPLLDLIQEGNLGLIRAVEKFDYKMGYKLSTYATWWIRQAVTRALADQGRTIRLPVHVADQVRRLMRARRQLAQKLNREPTAEELAKESGFTEQRVQELLDLVEDPVSLETPVGDGESMYADLIEDVNSDRPDETTAEKLRRKELAEALLRLNPRMQRVLALRFGLDGESPQTLEEVGAGLGITRERVRQLESRALRELRTVAPDLELYLRT*