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13_1_20cm_full_scaffold_591_10

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 10700..11371

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6Q4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 214.0
  • Bit_score: 222
  • Evalue 5.90e-55
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aer similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 214.0
  • Bit_score: 222
  • Evalue 8.40e-55
RNA polymerase sigma-37 subunit RpsB/SigB similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 214.0
  • Bit_score: 217
  • Evalue 4.20e-54

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Taxonomy

Collinsella aerofaciens → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 672
GTGGAGCTGTTCAACAACCTCGTGGTCTTCCTAGCCAAGAAATTCAGCAACCGCGGCGAGCCGCTCGAGGACATCGTCCAGGTCGGCTATATTGGCTTGCTTGCGGCGATCGAGCGTTTCGAGCCGCAGCGCGGGCTCGAGTTTTCGACCTTCGCCACGCCCACCATCGTTGGCGAGATCAAACGATACTTCCGCGACAAGAGCTGGGCTGTCAAGGTGCCGCGCCGGCTCCAGGAAACAATGCAGCGCGCCGACCTGGCCCAGCAGCGGCTGCAGGGCAGACTCGGTCGCCAGCCGTCGGTCAATGAGATCGCCAAGGAACTCGATCTTCAACCCGAAGAGGTGCTGGCGGCGATGGAGGCGAGCCCGGCGCAGCGCACCATTCCATTCGAGTCCACCGGCCCTTCACCGCGGGACGACGACGGCCTCCAGCTCACCGAGCGGCTCGGGCGGGAAGACGAGAACCTCGACAAGGTGGAGCTCCAGGACCTGCTCGACCAGGCGATGCGTCACCTGACACCCCGGGAGCGTCGGATCATGTACCTGCGATTCGTCGACGAGCTGCCCCAGGCAGAGGTCGCGAAGCGGCTCGGGATCTCGCAAATGCACGTTTCGCGGCTGCAGCGGGCTGCGGTCGAGCAACTCAAGAAGGAATTGCCGGTTACGAGTTAG
PROTEIN sequence
Length: 224
VELFNNLVVFLAKKFSNRGEPLEDIVQVGYIGLLAAIERFEPQRGLEFSTFATPTIVGEIKRYFRDKSWAVKVPRRLQETMQRADLAQQRLQGRLGRQPSVNEIAKELDLQPEEVLAAMEASPAQRTIPFESTGPSPRDDDGLQLTERLGREDENLDKVELQDLLDQAMRHLTPRERRIMYLRFVDELPQAEVAKRLGISQMHVSRLQRAAVEQLKKELPVTS*