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13_1_20cm_full_scaffold_7990_13

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(7812..8519)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IV06_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 221.0
  • Bit_score: 206
  • Evalue 2.70e-50
sigF; RNA polymerase sigma-F factor similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 217.0
  • Bit_score: 206
  • Evalue 7.80e-51
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:ADP78886.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 221.0
  • Bit_score: 206
  • Evalue 3.90e-50

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGTTCGAGACGCGTCGTCCGGCCGCTCAGGCCGAGGAACTGGTAGAGGAGTACCTCCCACTCGCACGGCGCCTCGCCATGCGCTACCGCTACACGAGCGAGCCGATCGAAGACCTGGTGCAGGTCGCGTCAATGGGACTCGTGCTCGCGGCGCAGCGGTACGACGCCGAGCGCGGTACATCGTTTGCGAGCTTCGCGGTCCCCACGATCATCGGGGAGCTGCGGCGCCACATTCGCGACCACGGCTGGTCGGCGCGCGTGCCGCGGAGCGTGCAGGAGAACGTGATGAAGGTGCACGCCGCCACCGACGAGCTGGGTGCCCGTATCGGCCGCTCCCCGTCACCCAGGGAGCTCGCCGCCGAGACCGATCTCGGCGTGGAGGATGTCCTCGAGGCGACGCTGGCCACAACGGCCTACGAGGCGGCGTCGCTCGACCATCGGATTGACGGCGACGACGACTCCCCCGAGCCTCCGATCACGATCGGCGTTGACGACCCGGGCTACGAGCACGTCGAGCGCGCTGTCGTGATCTGGCCGGCCGTCAGTGAGCTCCCACCAGACGAGCGCGCGGTGGTGGCGCTCCGCTTCCTGGGCGACCTCACCCAGTCGGAGATCGCCGCGATGATCGGCGTCTCCCAGATGCAGGTATCGCGCCTCCTGCGCCGCGCCCTCGACCGCATCCACACGGCGACTGCCGCGGCGGTCTGA
PROTEIN sequence
Length: 236
VFETRRPAAQAEELVEEYLPLARRLAMRYRYTSEPIEDLVQVASMGLVLAAQRYDAERGTSFASFAVPTIIGELRRHIRDHGWSARVPRSVQENVMKVHAATDELGARIGRSPSPRELAAETDLGVEDVLEATLATTAYEAASLDHRIDGDDDSPEPPITIGVDDPGYEHVERAVVIWPAVSELPPDERAVVALRFLGDLTQSEIAAMIGVSQMQVSRLLRRALDRIHTATAAAV*