Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
Probable cold shock protein scoF n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQQ8_9PLAN (db=UNIREF evalue=4.0e-13 bit_score=77.0 identity=63.49 coverage=91.044776119403) | similarity |
UNIREF
DB: UNIREF |
63.49 | 91.04 | 77 | 4.00e-13 | mie:LG41_13710 |
cold-shock protein | similarity |
KEGG
DB: KEGG |
50.7 | 67.0 | 70 | 2.40e-10 | mie:LG41_13710 |
COLD_SHOCK (db=PatternScan db_id=PS00352 from=14 to=33 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | mie:LG41_13710 |
CSD (db=HMMPfam db_id=PF00313 from=1 to=66 evalue=4.8e-21 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.80e-21 | mie:LG41_13710 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=66 evalue=3.7e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.70e-18 | mie:LG41_13710 |
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=66 evalue=8.1e-18 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 8.10e-18 | mie:LG41_13710 |
no description (db=HMMSmart db_id=SM00357 from=3 to=66 evalue=1.2e-15 interpro_id=IPR011129 interpro_description=Cold shock protein GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.20e-15 | mie:LG41_13710 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=66 evalue=7.7e-12 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 7.70e-12 | mie:LG41_13710 |
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=1 to=63 evalue=7.3e-10) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 7.30e-10 | mie:LG41_13710 |
Putative cold shock protein scoF {ECO:0000313|EMBL:EKE11404.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 66.0 | 133 | 8.90e-29 | K2F0D6_9BACT |