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ACD15_13_12 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Probable cold shock protein scoF n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQQ8_9PLAN (db=UNIREF evalue=4.0e-13 bit_score=77.0 identity=63.49 coverage=91.044776119403) similarity UNIREF
DB: UNIREF
63.49 91.04 77 4.00e-13 mie:LG41_13710
cold-shock protein similarity KEGG
DB: KEGG
50.7 67.0 70 2.40e-10 mie:LG41_13710
COLD_SHOCK (db=PatternScan db_id=PS00352 from=14 to=33 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site) iprscan interpro
DB: PatternScan
null null null 0.0 mie:LG41_13710
CSD (db=HMMPfam db_id=PF00313 from=1 to=66 evalue=4.8e-21 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 4.80e-21 mie:LG41_13710
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=66 evalue=3.7e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
null null null 3.70e-18 mie:LG41_13710
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=66 evalue=8.1e-18 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMPIR
null null null 8.10e-18 mie:LG41_13710
no description (db=HMMSmart db_id=SM00357 from=3 to=66 evalue=1.2e-15 interpro_id=IPR011129 interpro_description=Cold shock protein GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMSmart
null null null 1.20e-15 mie:LG41_13710
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=66 evalue=7.7e-12 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
null null null 7.70e-12 mie:LG41_13710
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=1 to=63 evalue=7.3e-10) iprscan interpro
DB: HMMPanther
null null null 7.30e-10 mie:LG41_13710
Putative cold shock protein scoF {ECO:0000313|EMBL:EKE11404.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
100.0 66.0 133 8.90e-29 K2F0D6_9BACT