Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
smpB; ssrA RNA (tmRNA)-binding protein | similarity |
KEGG
DB: KEGG |
55.4 | 148.0 | 159 | 9.00e-37 | ddf:DEFDS_1882 |
seg (db=Seg db_id=seg from=114 to=131) | iprscan |
interpro
DB: Seg |
null | null | null | null | ddf:DEFDS_1882 |
SSRP (db=PatternScan db_id=PS01317 from=22 to=34 evalue=0.0 interpro_id=IPR020081 interpro_description=SsrA-binding protein, conserved site) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | ddf:DEFDS_1882 |
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=3 to=146 evalue=4.1e-75 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 4.10e-75 | ddf:DEFDS_1882 |
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=1 to=128 evalue=8.5e-45 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: superfamily |
null | null | null | 8.41e-45 | ddf:DEFDS_1882 |
no description (db=Gene3D db_id=G3DSA:2.40.280.10 from=3 to=125 evalue=1.8e-39 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.80e-39 | ddf:DEFDS_1882 |
SmpB (db=HMMPfam db_id=PF01668 from=3 to=67 evalue=6.6e-28 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.60e-28 | ddf:DEFDS_1882 |
SSRP_THEMA_P56944; (db=BlastProDom db_id=PD004488 from=4 to=113 evalue=6.0e-27 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: BlastProDom |
null | null | null | 6.00e-27 | ddf:DEFDS_1882 |
SmpB (db=HAMAP db_id=MF_00023 from=2 to=147 evalue=27.168 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.72e+01 | ddf:DEFDS_1882 |
smpB; SsrA RNA (tmRNA)-binding protein; K03664 SsrA-binding protein alias=ACD15_C00017G00002,ACD15_838.15597.17G0002,ACD15_838.15597.17_2 id=8327 tax=ACD15 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 293 | 4.50e-77 | ddf:DEFDS_1882 |
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 149.0 | 293 | 1.50e-76 | K2EKI5_9BACT |