ggKbase home page

ACD15_44_17

Organism: ACD15

near complete RP 50 / 55 MC: 14 BSCG 47 / 51 MC: 5 ASCG 0 / 38
Location: comp(9733..10392)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 218.0
  • Bit_score: 220
  • Evalue 3.70e-55
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=168 to=202 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=216 evalue=4.6e-98 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.60e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 660
ATGGGAAAAAAAGTTAATCCAATTGGACTTCGAATCGGAATCACAAATACATGGAAATCAAAATGGTTTGGAGGAAAAAAGGAGTATAAGAACAACTTAAGACAAGATATTGAACTTAGGCAAGCAATATGCAAAAAATGGAAAAATGCTGCTATTGCTGAGGTTGAAATTGAAAGATCAACTGCTATGATCAAAGTGATTGTAAAAACTGCCAGACCAGGTGTTCTTATTGGAAGAGGCGGAAGCGGAGTTGAAGATATGCAGACTTTTGTAAAAAATAATTTTTTTAAACAGAAAAAAACTGCGTTGAAAATAGAAGTTCAGGAAGTTAAGAATTTTGAAGAAAATGCATCCCTTATTGCTCAAAATATTGCAGAGCAGTTAGAAAAGAGAATCCCTTTCAGAAGAGCTATGAAATCCATGCTTGATCAGGTTTCTAAAAACACTGCCATTAAAGGAATTAAAATCGAAATGTCAGGACGTTTAGGTGGGGCAGAAATGGCGAGAAGGGAATGGTCGAATAAGGGAACATTGCCATTGCATACTCTTCGAGCCAATATTGATTTTGCCAGGGCTACTGCCTATACGACATATGGAACATTGGGAGTGAAGGTGTGGCTATATAAAGGAGAAGTTTTTAATAAGGAGAATAAGAAATAA
PROTEIN sequence
Length: 220
MGKKVNPIGLRIGITNTWKSKWFGGKKEYKNNLRQDIELRQAICKKWKNAAIAEVEIERSTAMIKVIVKTARPGVLIGRGGSGVEDMQTFVKNNFFKQKKTALKIEVQEVKNFEENASLIAQNIAEQLEKRIPFRRAMKSMLDQVSKNTAIKGIKIEMSGRLGGAEMARREWSNKGTLPLHTLRANIDFARATAYTTYGTLGVKVWLYKGEVFNKENKK*