| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSC0_9FIRM (db=UNIREF evalue=0.0 bit_score=780.0 identity=56.81 coverage=97.8662873399715) | similarity |
UNIREF
DB: UNIREF |
56.81 | 97.87 | 780 | 0.0 | hmo:HM1_2322 |
| pnp; polynucleotide phosphorylase | similarity |
KEGG
DB: KEGG |
56.0 | 698.0 | 756 | 7.80e-216 | hmo:HM1_2322 |
| pnp; polynucleotide phosphorylase | rbh |
KEGG
DB: KEGG |
56.0 | 698.0 | 756 | 7.80e-216 | hmo:HM1_2322 |
| Polyribonucleotide nucleotidyltransferase (db=HMMPIR db_id=PIRSF005499 from=1 to=702 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 0.0 | hmo:HM1_2322 |
| polynuc_phos: polyribonucleotide nucleot (db=HMMTigr db_id=TIGR03591 from=9 to=697 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 0.0 | hmo:HM1_2322 |
| POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (db=HMMPanther db_id=PTHR11252 from=145 to=698 evalue=9.8e-211 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 9.80e-211 | hmo:HM1_2322 |
| Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=1 to=144 evalue=9.7e-46 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.40e-45 | hmo:HM1_2322 |
| Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=306 to=460 evalue=6.3e-41 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) | iprscan |
interpro
DB: superfamily |
null | null | null | 6.30e-41 | hmo:HM1_2322 |
| Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=145 to=238 evalue=2.6e-27 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.60e-27 | hmo:HM1_2322 |
| Eukaryotic type KH-domain (KH-domain type I) (db=superfamily db_id=SSF54791 from=545 to=641 evalue=1.4e-24) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.40e-24 | hmo:HM1_2322 |
| Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=457 to=565 evalue=5.4e-24 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.40e-24 | hmo:HM1_2322 |
| no description (db=HMMSmart db_id=SM00316 from=625 to=695 evalue=2.1e-23) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.10e-23 | hmo:HM1_2322 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=613 to=696 evalue=3.9e-23 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.90e-23 | hmo:HM1_2322 |
| RNase_PH (db=HMMPfam db_id=PF01138 from=13 to=144 evalue=5.7e-21 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.70e-21 | hmo:HM1_2322 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=622 to=697 evalue=1.9e-20 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.90e-20 | hmo:HM1_2322 |
| S1 (db=HMMPfam db_id=PF00575 from=624 to=695 evalue=3.1e-16 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.10e-16 | hmo:HM1_2322 |
| RNase_PH_C (db=HMMPfam db_id=PF03725 from=147 to=211 evalue=1.2e-15 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.20e-15 | hmo:HM1_2322 |
| RNase_PH (db=HMMPfam db_id=PF01138 from=327 to=460 evalue=5.7e-15 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.70e-15 | hmo:HM1_2322 |
| no description (db=HMMSmart db_id=SM00322 from=557 to=622 evalue=2.5e-12 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.50e-12 | hmo:HM1_2322 |
| KH_1 (db=HMMPfam db_id=PF00013 from=562 to=615 evalue=1.9e-10 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.90e-10 | hmo:HM1_2322 |
| Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 (db=superfamily db_id=SSF46915 from=238 to=325 evalue=2.0e-08 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.00e-08 | hmo:HM1_2322 |
| PNPase (db=HMMPfam db_id=PF03726 from=243 to=324 evalue=4.5e-06 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.50e-06 | hmo:HM1_2322 |
| RNase_PH_C (db=HMMPfam db_id=PF03725 from=464 to=532 evalue=4.9e-06 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.90e-06 | hmo:HM1_2322 |
| KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=558 to=617 evalue=11.594 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.16e+01 | hmo:HM1_2322 |
| S1 (db=ProfileScan db_id=PS50126 from=627 to=695 evalue=20.471 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.05e+01 | hmo:HM1_2322 |
| PNPase (db=HAMAP db_id=MF_01595 from=2 to=698 evalue=28.302 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.83e+01 | hmo:HM1_2322 |
| hmo:HM1_2322 pnp; polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] alias=ACD15_C00046G00020,ACD15_19057.52719.18G0020,ACD15_19057.52719.18_20 id=8965 tax=ACD15 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 1357 | 0.0 | hmo:HM1_2322 |
| Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=77133 |
UNIPROT
DB: UniProtKB |
100.0 | 702.0 | 1357 | 0.0 | K2F0N7_9BACT |
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