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ACD15_97_1

Organism: ACD15

near complete RP 50 / 55 MC: 14 BSCG 47 / 51 MC: 5 ASCG 0 / 38
Location: comp(1..1029)

Top 3 Functional Annotations

Value Algorithm Source
sigA; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 335.0
  • Bit_score: 144
  • Evalue 6.90e-32
SIGMA70_1 (db=PatternScan db_id=PS00715 from=174 to=187 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=101 to=220 evalue=8.9e-34 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.90e-34

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1029
ATGGAAGCGAAGAAGGTTTACGATTTAGACAAACTGCCCTTGAAGAAAAATGCGGCCGGCGTCATTCAACGGGCAAAGATCATCGGGCAAATAACCGATAAGGACATAGCCGGCATTCTTCCTAAAAATCTATTGCACCGAAAAGATGAACTGCTGAAAACAATTCGCGCCGTTTACGATGTTTTGGAAGTTTTGAACATCGCATTAGTGAGAAATAACAGCCTCTCTGCTAAAAAAAGCGAAGGCGGCGTTGAAATTAAAAAGGCTAGCCAAGGCTGCGGCGCCTCCAAGAATCCCCCTATTTATTATTCGCGCGACATAATAGGAATATATGGAGAAGAAATTTCCAAGTTCGATGTTTTGGATAAAGAAAAGGTGAAAGAATTAGCCGAGGAATATCAATTAAACGGCTCTTTGTCCGCCCGCAATCAGCTCATTAAGCACAATCTTAGACTTGCTTTCAAGGTCGCCGGATACTATAAAGACAAAATAGGCGCGCGTAATGCCCTGGAATTTCTCGATCTTGTCCAAGCGGGAAGTCTCGGATTGATAACCTCAGTGGAGAAATTTAATCCTTCTTTAGGATTTGAATTTTCCACATACGCAATGTGGAATATCAAGCAGGCGATATTCAGGACAATATACAATCAAAGCAAGACGATTCGAGAGCCTGTGCATTTTCAGGAAGATGAAAAAAGGGTGATCCGAGCGATGTCCCGCCTTTATCTTAGCGGCGGAAAAGAACCGGACGCGGAGCAATTGGCTTTCGCTCTGTCAATGCCTATTGGACGGGTAAAGGAGGTGTTGAGACAGCTGGACAGAAAAATATTATCGCTTGATGAGAAATACGACAATGGCGATAAAGAAATCAGCGAGCTGTATGGAAGCATTGAAAGCAAAGCTGTTCCTACTCCGGAACTATCGCTTTTGGCCAAACACGAGGCTAAAAGAGCGTTTCAAAACATCAGTGATATTCTTGCTAAAATTTCCGCTTATTGCACGGACAAAGAACAAGATATGTTTCGGATG
PROTEIN sequence
Length: 343
MEAKKVYDLDKLPLKKNAAGVIQRAKIIGQITDKDIAGILPKNLLHRKDELLKTIRAVYDVLEVLNIALVRNNSLSAKKSEGGVEIKKASQGCGASKNPPIYYSRDIIGIYGEEISKFDVLDKEKVKELAEEYQLNGSLSARNQLIKHNLRLAFKVAGYYKDKIGARNALEFLDLVQAGSLGLITSVEKFNPSLGFEFSTYAMWNIKQAIFRTIYNQSKTIREPVHFQEDEKRVIRAMSRLYLSGGKEPDAEQLAFALSMPIGRVKEVLRQLDRKILSLDEKYDNGDKEISELYGSIESKAVPTPELSLLAKHEAKRAFQNISDILAKISAYCTDKEQDMFRM