ggKbase | organisms

Consensus taxonomy: ACD39 → Bacteria

Metagenomic Context

Parent: ALUMROCK_MS4_ACD39_47_9_partial Manually curated genome
Original version: ALUMROCK_MS4_ACD39_47_9_partial

Properties

Avg. coverage: 1.00 Longest contig: 18.81 Kbp Bin length: 1.64 Mbp GC content: 46.57 %

Contigs count: 935 Features count: 2154 rRNAs count: 1 tRNAs count: 5

Genome completeness

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 5 / 38

Displaying items 1-50 of 935 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
ar4r2_scaffold_26283 Phylum: ACD39 (66.67%)	3	1215 bp	52.18	1.00	109.88
ar4r2_scaffold_23256 Species: BJP_IG2102_ACD39_51_10 (50%)	2	1349 bp	49.37	1.00	106.30
ar4r2_scaffold_31772 Species: BJP_IG2102_ACD39_51_10 (100%)	2	931 bp	47.15	1.00	105.69
ar4r2_scaffold_32131 Species: BJP_IG2102_ACD39_51_10 (50%)	2	998 bp	46.49	1.00	104.61
ar4r2_scaffold_20929 Species: BJP_IG2102_ACD39_51_10 (100%)	2	1431 bp	47.03	1.00	103.15
ar4r2_scaffold_31562 Species: BJP_IG2103_ACD39_50_23 (50%)	2	970 bp	48.25	1.00	102.68
ar4r2_scaffold_11017 Domain: Bacteria (66.67%)	3	2574 bp	43.47	1.00	102.45
ar4r2_scaffold_21397 Species: GWC2_ACD39_50_8_curated (100%)	2	1251 bp	49.16	1.00	102.16
ar4r2_scaffold_32017 Species: BJP_IG2103_ACD39_50_23 (50%)	2	855 bp	41.99	1.00	102.11
ar4r2_scaffold_28052 Species: BJP_IG2102_ACD39_51_10 (100%)	2	1125 bp	48.44	1.00	101.60
ar4r2_scaffold_10206 Species: BJP_IG2102_ACD39_51_10 (66.67%)	3	2576 bp	47.75	1.00	101.55
ar4r2_scaffold_25292 Species: GWC2_ACD39_50_8_curated (66.67%)	3	1238 bp	49.76	1.00	101.54
ar4r2_scaffold_29570 Species: GWC2_ACD39_50_8_curated (50%)	2	1095 bp	48.68	1.00	101.37
ar4r2_scaffold_12194 Species: BJP_IG2102_ACD39_51_10 (60%)	5	2343 bp	48.78	1.00	101.28
ar4r2_scaffold_29776 Species: GWC2_ACD39_50_8_curated (50%)	2	1094 bp	46.98	1.00	101.19
ar4r2_scaffold_31924 Species: BJP_IG2102_ACD39_51_10 (50%)	2	1003 bp	44.17	1.00	101.10
ar4r2_scaffold_31969 Species: GWC2_ACD39_50_8_curated (66.67%)	3	1028 bp	47.96	1.00	100.97
ar4r2_scaffold_24065 Species: BJP_IG2102_ACD39_51_10 (50%)	2	1269 bp	48.38	1.00	100.95
ar4r2_scaffold_21132 Species: GWC2_ACD39_50_8_curated (50%)	2	1526 bp	47.31	1.00	100.85
ar4r2_scaffold_18776 Species: BJP_IG2103_ACD39_50_23 (100%)	2	1536 bp	49.41	1.00	100.78
ar4r2_scaffold_19110 Species: BJP_IG2102_ACD39_51_10 (50%)	2	1578 bp	44.99	1.00	100.76
ar4r2_scaffold_28585 Species: uncultured bacterium (50%)	2	1129 bp	45.79	1.00	100.71
ar4r2_scaffold_14417 Species: GWC2_ACD39_50_8_curated (50%)	4	2032 bp	48.13	1.00	100.69
ar4r2_scaffold_19457 Species: BJP_IG2102_ACD39_51_10 (50%)	2	1572 bp	44.53	1.00	100.57
ar4r2_scaffold_26038 Species: BJP_IG2102_ACD39_51_10 (50%)	2	1226 bp	48.04	1.00	100.57
ar4r2_scaffold_24668 Species: BJP_IG2102_ACD39_51_10 (50%)	2	1149 bp	47.78	1.00	100.52
ar4r2_scaffold_24600 Species: BJP_IG2103_ACD39_50_23 (66.67%)	3	1284 bp	47.90	1.00	100.47
ar4r2_scaffold_18856 Species: GWC2_ACD39_50_8_curated (100%)	2	1610 bp	42.86	1.00	100.44
ar4r2_scaffold_32423 Species: BJP_IG2103_ACD39_50_23 (50%)	2	941 bp	50.58	1.00	100.43
ar4r2_scaffold_27464 Species: BJP_IG2102_ACD39_51_10 (66.67%)	3	1169 bp	51.33	1.00	100.34
ar4r2_scaffold_23206 Species: uncultured bacterium (50%)	2	1283 bp	47.54	1.00	100.31
ar4r2_scaffold_10814 Species: BJP_IG2103_ACD39_50_23 (50%)	2	2614 bp	43.76	1.00	100.31
ar4r2_scaffold_30085 Species: GWC2_ACD39_50_8_curated (50%)	2	1080 bp	49.91	1.00	100.28
ar4r2_scaffold_21257 Species: BJP_IG2103_ACD39_50_23 (50%)	2	1457 bp	45.02	1.00	100.28
ar4r2_scaffold_24998 Species: GWC2_ACD39_50_8_curated (50%)	2	1248 bp	54.33	1.00	100.24
ar4r2_scaffold_22887 Species: BJP_IG2103_ACD39_50_23 (50%)	2	1368 bp	49.20	1.00	100.22
ar4r2_scaffold_19906 Species: BJP_IG2102_ACD39_51_10 (50%)	2	1491 bp	44.33	1.00	100.20
ar4r2_scaffold_14516 Phylum: ACD39 (66.67%)	3	2003 bp	47.58	1.00	100.20
ar4r2_scaffold_31716 Species: GWC2_ACD39_50_8_curated (50%)	2	1018 bp	45.09	1.00	100.20
ar4r2_scaffold_17617 Species: GWC2_ACD39_50_8_curated (100%)	2	1731 bp	47.78	1.00	100.17
ar4r2_scaffold_23659 Species: GWC2_ACD39_50_8_curated (100%)	2	1330 bp	49.62	1.00	100.15
ar4r2_scaffold_23340 Species: BJP_IG2103_ACD39_50_23 (50%)	2	1345 bp	50.04	1.00	100.15
ar4r2_scaffold_14208 Phylum: ACD39 (66.67%)	3	2055 bp	44.62	1.00	100.15
ar4r2_scaffold_14050 Species: BJP_IG2103_ACD39_50_23 (50%)	2	2070 bp	48.26	1.00	100.15
ar4r2_scaffold_21450 Species: BJP_IG2103_ACD39_50_23 (50%)	2	1447 bp	49.34	1.00	100.14
ar4r2_scaffold_18383 Species: BJP_S1_SUB10_Methylophilales_55_32 (50%)	2	1648 bp	42.23	1.00	100.12
ar4r2_scaffold_16806 Species: uncultured bacterium (50%)	2	1711 bp	48.10	1.00	100.12
ar4r2_scaffold_17455 Species: BJP_IG2103_ACD39_50_23 (50%)	2	1723 bp	45.62	1.00	100.12
ar4r2_scaffold_17410 Species: GWC2_ACD39_50_8_curated (50%)	2	1726 bp	48.78	1.00	100.12
ar4r2_scaffold_29550 Species: BJP_IG2103_ACD39_50_23 (50%)	2	1052 bp	48.95	1.00	100.10

Displaying items 1-50 of 935 in total

ALUMROCK_MS4_ACD39_47_9_partial_curated

ALUMROCK_MS4_ACD39_47_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

ALUMROCK_MS4_ACD39_47_9_partial_curated

ALUMROCK_MS4_ACD39_47_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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