ggKbase home page

ar4r2_scaffold_3401_4

Organism: ALUMROCK_MS4_Desulfocapsa_53_168_curated

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38
Location: comp(2840..4225)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 457.0
  • Bit_score: 485
  • Evalue 8.40e-134
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NEE5_DESSD similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 445.0
  • Bit_score: 476
  • Evalue 2.10e-131
  • rbh
ribosomal RNA small subunit methyltransferase RsmB similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 445.0
  • Bit_score: 476
  • Evalue 6.00e-132
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfobulbus sp. Tol-SR → Desulfobulbus → Desulfobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
TTGCCTCGCCATCAACCGGAAACCGCTCGCACCGCCCGCTTTGCGGCCATTGAAACCCTCTGTCAACTGGAACGCACCCGCTTACCGGTGGACAGCCTCTTTGACCGGATCACCGGGGAATGCCGGCTGGGCGACAGCGACCGCAACCTGGCCACGAACATCATCTATGGCGTTCTCAGGCAGCGGCAATCCCTGGAATCGCTGCTGCAAACCCTCTGCCGCCAGCCCCTTGCCCGCCTCAAACCCTTTGTCCGCCAGGCACTGCTGACCGGGCTGTACCAGCTCTTTTTTCTCGACCGCATCCCGGAATCGGCGGCGGTCAACGAGTCGGTCAAGGCCCTGCAGGCCGCGCGCCTGCCGAAAAACCTCCAGGGATTTGTCAACGCCGTGCTCCGGGAAAGTATCCGCCGCAAGGAACTGCTCGCGCCCCTGACCCAAACAGACAGGAGCGGAGCCCCGATCCTCAACCATCCGGACTGGTTGGTTCGCCGCTGGACAAAGCAATTCGGCGGGGAGGAAACGCGGCGCATCTGCGCGAGCAACAACCTCCAGTCGCCGCTGGTACTGAACGTCAACACCTGTGCCGCGACCCCGGAATCCGTCAGGGCGGCCCTTGCACAGGAAGGCCTGCCTGTTCTGACCGGCACTTACTGTCCGCACGCCTTGATCCTGCCTGATTTCCATGGGGCCATCGACCGGCTGCCGGGGTTTGCCCAGGGCCATTTCCAGGTTCAGGACGAGGGGGCCCAACTGCTGCCGCTGCTGCTAACCCCTGTTCGCCAGGGCGGCCTGTACTTAGACGCCTGCGCCGGGCTTGGCGGCAAGACCAGCAACCTCATCGGGCTCGGCCATGGCAAGGAGATCACCATCATGGCCGTGGAACCGGAAGCGCAGCGCCGGGGGAAATTTCATGCAAACATGCACCGTCTGCATCCCGGCACACCTGTACCCCTGATCGAAAATGATCTCCAGCACTTTGCCGAAGGAAGCGTCCTTCGTTTTGACGGCATCCTGGTTGACGCCCCCTGCTCCGGCACCGGCGTCACCGGCAGGCATCCGGATATCCGCTGGAGCCGCCGGGAAAACGACCTGCCCCGCTACCGGCAGACCCAGCTCATGCTGCTGGAACAGGCGGCAGGCCTGCTTGCCGAAGGCGGCGTCCTGGTCTATGCCACCTGTTCCCTGGAGCCCGAGGAAAATGAAGAGGTCATCACTCTCTTTCTGGCCGGCCATGCGGAATTCATGGTCGATGACTGCGCCCCTTTCCTGCCGGAACCGGCGCGGGAACTGGTCAGGGACAACTTTTTCGCCCCCCGGCCCGGGCCTGCCATTGACGGCTTTTTCGGGGCAAGAATGAGAAAAGGACAGAAGGACAGAAGAGAGTAG
PROTEIN sequence
Length: 462
LPRHQPETARTARFAAIETLCQLERTRLPVDSLFDRITGECRLGDSDRNLATNIIYGVLRQRQSLESLLQTLCRQPLARLKPFVRQALLTGLYQLFFLDRIPESAAVNESVKALQAARLPKNLQGFVNAVLRESIRRKELLAPLTQTDRSGAPILNHPDWLVRRWTKQFGGEETRRICASNNLQSPLVLNVNTCAATPESVRAALAQEGLPVLTGTYCPHALILPDFHGAIDRLPGFAQGHFQVQDEGAQLLPLLLTPVRQGGLYLDACAGLGGKTSNLIGLGHGKEITIMAVEPEAQRRGKFHANMHRLHPGTPVPLIENDLQHFAEGSVLRFDGILVDAPCSGTGVTGRHPDIRWSRRENDLPRYRQTQLMLLEQAAGLLAEGGVLVYATCSLEPEENEEVITLFLAGHAEFMVDDCAPFLPEPARELVRDNFFAPRPGPAIDGFFGARMRKGQKDRRE*