ggKbase home page

ar4r2_scaffold_8699_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49_curated

near complete RP 49 / 55 MC: 11 BSCG 49 / 51 MC: 10 ASCG 14 / 38 MC: 3
Location: comp(60..347)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJN5_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 95.0
  • Bit_score: 128
  • Evalue 2.90e-27
XRE family transcriptional regulator {ECO:0000313|EMBL:KHN49586.1}; TaxID=554 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum (Erwinia carotovora).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 95.0
  • Bit_score: 141
  • Evalue 3.60e-31
putative HTH-like transcriptional regulator, phage-related similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 95.0
  • Bit_score: 119
  • Evalue 3.00e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pectobacterium carotovorum → Pectobacterium → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGCTAACACATGAACAAATGGTGTCTGAGTGGATGAAAGATCCTAAATTCAAAGCCGAATACGACCGTATTGAACGCGAAGAAATGCCCATGCTTGATATGTTGCTTAAAGCACGTCGTGAAGTTGGCATGACACAATCACAAATTGCCGAAAAAATGGGAACGCAAGCTTCAGCCGTTGCACGTTTAGAACGTGCTTTGGCAACGGGCAAAATGTCTCCCTCTATCGCTACGCTACAAAAATACGCAGCGGCTTTGGGTAAAAGCTTAGAAATTCGGATGGTATAA
PROTEIN sequence
Length: 96
MLTHEQMVSEWMKDPKFKAEYDRIEREEMPMLDMLLKARREVGMTQSQIAEKMGTQASAVARLERALATGKMSPSIATLQKYAAALGKSLEIRMV*