ggKbase home page

ar4r2_scaffold_5448_4

Organism: ALUMROCK_MS4_Gammaproteobacteria_54_60_curated

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 3248..4216

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 322.0
  • Bit_score: 575
  • Evalue 3.30e-161
CRISPR-associated endonuclease Cas1 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BND1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 322.0
  • Bit_score: 575
  • Evalue 2.40e-161
  • rbh
CRISPR-associated protein Cas1 similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 322.0
  • Bit_score: 472
  • Evalue 7.90e-131
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGGAAACCTTGTTTATCTCGCGGGAAGCACAGCTTAGGCAGCATGAAAATACGCTGCAAATTAAAGTCGGCGATCAAGTCCGCTCGTTGCCGATTGAAAAATTGTCGCATGTGGTGTTGTTAGCGGAAAGTCGCCTCAATTCACGTTTGTTGGGTTTGTGTGGCAAGCATGGGGTGCGCTTGTCGGTGTTTGATTACTACGGTTATTTCAAGGGAGCCTTCGAGCCTTACGATCACAATCCGGCGGGTAAGGTGAAACTCAAACAGGCGGAATTGTTGCTCAACACGGAGCGGCGAATGAGTGTGGCGCGTGAGGTGGTACGAGGAGCCTCGCATAATATGCTGGCAAATTTGCGTTATCACCAGTATCGGGGCAATGAGGCGGTAAAGCAGCCCATTGCCGATATGCAAAAGCTGGTGACGACGCTGCCCAAAGCCTTGGATACGAATACTTTGATGGGGATTGAGGGGCAGTTACACCAGTATTATTACGCGGCATGGCCTGCTATTCATGCAGAACTGGATTTTGGCAAGCGGGTACGTCGTCCGCCAAATAATCCGATCAATTGCTTATTGTCTTTCCTCAATCAGTTGGTTTACACGGTGGTGCGTCATGAAATCAGTAAAACGCATTTGGAAGAGACGTTTAGCGTGTTGCATTCGCCGGGTTATGGGCGTGCCTCATTGAGTCTTGATCTAGCGGAACCGTTCAAGCCGGTGTTAACGGATATGCTGATTTTCCGCATGGTGCAACGGCGGATGTTGGATGACAGTTGGTTCGAGCAACATGATGCAGTGTGTTTACTAACAGAAACGGGGCGGCGCAATGTCGCTGAACAGTTTTCCTTGCGTTTGGAAGAGCATTATCAAGGGCACAGTTTCCGGCAATGGATCTACCGTGAGGCACTGGGGTTGGAACGAGAGGTATTGGGCGTAGCAGAATACGAAGTGTTTAAGCGGAGGGTATGA
PROTEIN sequence
Length: 323
METLFISREAQLRQHENTLQIKVGDQVRSLPIEKLSHVVLLAESRLNSRLLGLCGKHGVRLSVFDYYGYFKGAFEPYDHNPAGKVKLKQAELLLNTERRMSVAREVVRGASHNMLANLRYHQYRGNEAVKQPIADMQKLVTTLPKALDTNTLMGIEGQLHQYYYAAWPAIHAELDFGKRVRRPPNNPINCLLSFLNQLVYTVVRHEISKTHLEETFSVLHSPGYGRASLSLDLAEPFKPVLTDMLIFRMVQRRMLDDSWFEQHDAVCLLTETGRRNVAEQFSLRLEEHYQGHSFRQWIYREALGLEREVLGVAEYEVFKRRV*