ggKbase home page

ar4r2_scaffold_4880_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: 1581..2528

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 307.0
  • Bit_score: 478
  • Evalue 5.40e-132
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 304.0
  • Bit_score: 338
  • Evalue 1.30e-90
  • rbh
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BX08_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 307.0
  • Bit_score: 478
  • Evalue 3.80e-132
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGGTGGCTTCAATAGGGGAGATCTGGAAGCACGACACGGTGCTTCTTGATGAAGCGGTTGCTGCTTTGGCAATTCAACCTGCCGGTATTTATGTTGATGGCACTTATGGGCGTGGCGGGCATTCGGCGTTGCTGTTGCAACAATTGGGCGCGAATGGGCGTTTGATCGTGATAGATAAAGATCCGGTAGCGATTGCCCATGCGTGTGAACGTTACGCACATGACGCACGGGTTTTTGTTTGGCACGGGTCATTCCGGGATTTTCCGCAGGCAGTATTAGCGGCGGGGATTACGGATAAGATTGATGGGTTATTGTTGGATTTGGGGGTGTCATCACCGCAGTTGGATGATGCCGAACGCGGGTTTAGTTTTATGCGCGAAGGCCAGTTGGATATGCGCATGGATACTTCCAAAGGCTTGAGTGCTGCCGATTGGCTGAATCAGGCCAGCGATACGGAGATTGCTGATGTGCTGTGGCGTTATGGTGAAGAACGCTTTTCTCGCCAGATTGGGCGTGAAATTGTGCGAATTCGCCAGCAAACGCCTTTACAAACCACCACGCAGTTGGCGGATTTAATCGCGAGTGTCATTCGTAAACGTGAACCGGGCAAGCACCCCGCCACCCGCAGCTTTCAGGCGATTCGTATCAAAGTGAATCAGGAACTGGATGACGTTGAAGCGTGTTTACAGCACGCGGTTGACTCTCTGGCTCCCGGTGGACGCTTGGTGGTGATTAGTTTTCACTCGTTGGAAGACCGTATTGTTAAACACTATTTGCGCGATGTTTCTACGCCACCCAATATCCCAAGGGGGTTGCCAGTGATGCCAAAAATGATACAGCCGCCGATGCGTTTGATCGGTAAAGCCGTGCGCCCCAGTGATGCGGAGGTGCAAGGTAATGTGCGTTCACGCAGTGCGATTATGCGCATCGGCGAGCGCGTAGCATGA
PROTEIN sequence
Length: 316
MVASIGEIWKHDTVLLDEAVAALAIQPAGIYVDGTYGRGGHSALLLQQLGANGRLIVIDKDPVAIAHACERYAHDARVFVWHGSFRDFPQAVLAAGITDKIDGLLLDLGVSSPQLDDAERGFSFMREGQLDMRMDTSKGLSAADWLNQASDTEIADVLWRYGEERFSRQIGREIVRIRQQTPLQTTTQLADLIASVIRKREPGKHPATRSFQAIRIKVNQELDDVEACLQHAVDSLAPGGRLVVISFHSLEDRIVKHYLRDVSTPPNIPRGLPVMPKMIQPPMRLIGKAVRPSDAEVQGNVRSRSAIMRIGERVA*