ggKbase home page

ar4r2_scaffold_3337_4

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269_curated

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 3791..4534

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017443BF similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 252.0
  • Bit_score: 75
  • Evalue 5.90e-11
Outer membrane porin, OprD family {ECO:0000313|EMBL:KGQ20052.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.1
  • Coverage: 253.0
  • Bit_score: 73
  • Evalue 4.10e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAAGGCACGCCATTGGGACTATTTTGAACAGGTTTCGACGGTTGCTGGGGCGCCTAATGGCGTTCAAAATCCATTATGGGCGGCGAGCGCTCGGCATAAGCTAACGCCTCGCCTCAATATTGGTTTGTCTTATTATCAGCTCCCCGATTTAATGCAGTCGACTTACAGTGATTTGGTGTGGCGCTTGCCGTTAATCGGCATGGAAAATGAACTGCGTTTGAGTGCTCAATACATGAAGCAATCCAGTATTGGGCGTCAGTTACTGGCAACTCAGGGGTTTGATACTTGGAGTGCCGGGGTAAAGGCTGAGTGGGTGAATGGTCCGCTCACCATGGGTGTTGCGCGGTTGCAAACAGATACAGGGGCGGCTTATCGTGTGCCTTTTGGTTCATGGATGGGTTATGCCAGTCGTATCATCACCAATTTTAATCGTGCGGGTGAGCAAGTTTGGGCTGTGGATGCATTGCTTAGATTCGATCGTTTGGGCGTGCCTGGATTGAGCGTGCATTCGTCGGTAACTTGGGGTGATGGCGCCTTGTTAGCGACGAATCAAACACCTTTAGATAATCAGCGAGAAATTGATGTTACCATTGAATATCGATTTAAACAGGATGACTGGCCTAACTGGTTAAAACCTTTATGTATTCGTTTGCGTTCGGGACACTTAGCACAGGGTGCGCAGTCGTTGACTATGCAGACCCAAGAACAGCATGTGATTGTGAACTATGCAATGTCCATGTGA
PROTEIN sequence
Length: 248
MKARHWDYFEQVSTVAGAPNGVQNPLWAASARHKLTPRLNIGLSYYQLPDLMQSTYSDLVWRLPLIGMENELRLSAQYMKQSSIGRQLLATQGFDTWSAGVKAEWVNGPLTMGVARLQTDTGAAYRVPFGSWMGYASRIITNFNRAGEQVWAVDALLRFDRLGVPGLSVHSSVTWGDGALLATNQTPLDNQREIDVTIEYRFKQDDWPNWLKPLCIRLRSGHLAQGAQSLTMQTQEQHVIVNYAMSM*