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AR1-0.65_scaffold_4510_1

Organism: AR_2015_1-065_BD1-5_24_6_curated

partial RP 45 / 55 MC: 5 BSCG 35 / 51 MC: 4 ASCG 2 / 38
Location: comp(2..1150)

Top 3 Functional Annotations

Value Algorithm Source
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 383.0
  • Bit_score: 587
  • Evalue 5.50e-165
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 383.0
  • Bit_score: 587
  • Evalue 7.70e-165
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 349.0
  • Bit_score: 381
  • Evalue 1.70e-103
  • rbh

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Taxonomy

uncultured bacterium (gcode 4) → Bacteria

Sequences

DNA sequence
Length: 1149
AAAATTCCTGTTGATAGAGATGAAGATAAAAGAAGAATCTGAAAATGATTACAAAAATTTATTGATGTAACTATTGATCAAAAATTACTTGATTGAATGCCTCTTGAAATCCAAGAATTGATGAAAAAATGAAAATATGAGTGAAAAATTACTCAAGATGAAATAATGGCAGCAATCCCTCACGCTGAAGATGACATTGATTTACTTGATGAAATTTATACTAGATTTTTACAGTTAAAAATTGAAATTGTTGATAATTTAGATAAAGATACTCTATTTGACTTAGAAAAAAATCCAAAATTAGATAAATCTGCTATTTCATTATCTGAGATTAGTGATGACTCTATAAGAATGTATTTAAATGAAATATGAAGAGTTCCGTTATTGAGTCAAGATGAAGAAATTGAATTATGAAAGAGAGTTATTGCTTGAGATCAGGAAGCCAGAAAAAGACTTGCTGCCGCAAACTTAAGGCTTGTTGTATCAATTGCTAAAAAATATATGTGAAGAGGTTTATGACTTCTTGATTTGATTCAAGAATGAAATGTTTGACTTTTTAGAGCTGTTGATAAATTTGATCCTAGTAAATGATTTAAATTCTCAACTTATGCTACATGGTGGATTAGGCAATGAGTAACTAGATCAATTGCTGATCAAGCCAGAACAATAAGAGTCCCAGTTCATATGATTGAAACTATAAATAAATTTACACATACTTTTAGAAGACTTACTCAAGAATTAACTCGTGAGCCACTTATGGAAGAACTTGCGACAGAACTTGATATGGATATCAGAAAAGTAAGACAAATAATGAGAATAAGTCAAGATATACTTAGCATAGATTCACCAGTTTGATCTGAAGAAGATACTTCCCTATGAGATTTTATTGAGGATGATAAAAATCCTTCTCCTGATGAACAAACAAATATGAAATTATTAAAGGAAAATCTATATGAGATGCTTGATTTTTTAACTCAGAGAGAAAAAAAGATTATTATTATGAGATTTGGTTTAGATGGTTGAGATGTTCATACTCTTGAAGAAGTTTGAAAAGAATTTTGAGTTACTAGAGAAAGAATTAGACAAATAGAAAGTAAAACTTTAGAAAAACTTAAAGAACACCCTAATGCTGATAAAATAAAATTTTTT
PROTEIN sequence
Length: 383
KIPVDRDEDKRRIGKGLQKFIDVTIDQKLLDGMPLEIQELMKKGKYEGKITQDEIMAAIPHAEDDIDLLDEIYTRFLQLKIEIVDNLDKDTLFDLEKNPKLDKSAISLSEISDDSIRMYLNEIGRVPLLSQDEEIELGKRVIAGDQEARKRLAAANLRLVVSIAKKYMGRGLGLLDLIQEGNVGLFRAVDKFDPSKGFKFSTYATWWIRQGVTRSIADQARTIRVPVHMIETINKFTHTFRRLTQELTREPLMEELATELDMDIRKVRQIMRISQDILSIDSPVGSEEDTSLGDFIEDDKNPSPDEQTNMKLLKENLYEMLDFLTQREKKIIIMRFGLDGGDVHTLEEVGKEFGVTRERIRQIESKTLEKLKEHPNADKIKFF