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ACD65_8_11 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
30S ribosomal protein S13 similarity KEGG
DB: KEGG
63.6 118.0 155 1.40e-35 elm:ELI_4009
seg (db=Seg db_id=seg from=32 to=48) iprscan interpro
DB: Seg
null null null null elm:ELI_4009
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=87 to=100 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
null null null 0.0 elm:ELI_4009
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=114 evalue=1.1e-66 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
null null null 1.10e-66 elm:ELI_4009
Ribosomal protein, S13p/S13a/S18e/organellar S13 types (db=HMMPIR db_id=PIRSF002134 from=1 to=123 evalue=2.8e-48 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPIR
null null null 2.80e-48 elm:ELI_4009
30S/40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR10871 from=1 to=122 evalue=7.8e-48) iprscan interpro
DB: HMMPanther
null null null 7.80e-48 elm:ELI_4009
30S RIBOSOMAL PROTEIN S13 (db=HMMPanther db_id=PTHR10871:SF1 from=1 to=122 evalue=7.8e-48) iprscan interpro
DB: HMMPanther
null null null 7.80e-48 elm:ELI_4009
S13-like H2TH domain (db=superfamily db_id=SSF46946 from=2 to=125 evalue=1.0e-37 interpro_id=IPR010979 interpro_description=Ribosomal protein S13-like, H2TH GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: superfamily
null null null 1.00e-37 elm:ELI_4009
Ribosomal_S13 (db=HMMPfam db_id=PF00416 from=3 to=108 evalue=3.0e-36 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
null null null 3.00e-36 elm:ELI_4009
no description (db=Gene3D db_id=G3DSA:1.10.8.50 from=1 to=71 evalue=2.3e-20) iprscan interpro
DB: Gene3D
null null null 2.30e-20 elm:ELI_4009
no description (db=Gene3D db_id=G3DSA:4.10.910.10 from=72 to=125 evalue=1.4e-15) iprscan interpro
DB: Gene3D
null null null 1.40e-15 elm:ELI_4009
RIBOSOMAL_S13_2 (db=ProfileScan db_id=PS50159 from=4 to=111 evalue=37.007 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: ProfileScan
null null null 3.70e+01 elm:ELI_4009
30S ribosomal protein S13 {ECO:0000313|EMBL:KKT19762.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;" UNIPROT
DB: UniProtKB
100.0 126.0 251 7.30e-64 A0A0G1HJF0_9BACT
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 alias=ACD65_C00008G00011,ACD65_203031.8633.6G0011,ACD65_203031.8633.6_11 id=97780 tax=ACD65 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=PER organism_desc=PER similarity UNIREF
DB: UNIREF90
100.0 null 250 2.10e-64 elm:ELI_4009
  • SCG Annotations
  • BSCG ribosomal protein S13