| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| DNA-directed RNA polymerase, alpha subunit | similarity |
KEGG
DB: KEGG |
44.5 | 321.0 | 261 | 3.70e-67 | tto:Thethe_00412 |
| DNA-directed RNA polymerase subunit alpha n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PEC5_CLOTS (db=UNIREF evalue=2.0e-65 bit_score=253.0 identity=44.55 coverage=95.398773006135) | similarity |
UNIREF
DB: UNIREF |
44.55 | 95.4 | 253 | 2.00e-65 | tto:Thethe_00412 |
| rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=22 to=324 evalue=3.2e-112 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 3.20e-112 | tto:Thethe_00412 |
| no description (db=HMMSmart db_id=SM00662 from=22 to=229 evalue=1.1e-74 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.10e-74 | tto:Thethe_00412 |
| Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=52 to=173 evalue=2.7e-38 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.70e-38 | tto:Thethe_00412 |
| no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=52 to=172 evalue=2.9e-34 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.90e-34 | tto:Thethe_00412 |
| RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=3 to=229 evalue=4.2e-30 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.20e-30 | tto:Thethe_00412 |
| RNA_pol_A_bac (db=HMMPfam db_id=PF01000 from=61 to=153 evalue=3.8e-23 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.80e-23 | tto:Thethe_00412 |
| RNA_pol_L (db=HMMPfam db_id=PF01193 from=27 to=226 evalue=1.1e-21 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.10e-21 | tto:Thethe_00412 |
| RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=252 to=316 evalue=1.8e-15 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.80e-15 | tto:Thethe_00412 |
| C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=255 to=323 evalue=6.9e-14 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: superfamily |
null | null | null | 6.90e-14 | tto:Thethe_00412 |
| no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=255 to=323 evalue=4.7e-12) | iprscan |
interpro
DB: Gene3D |
null | null | null | 4.70e-12 | tto:Thethe_00412 |
| RPOA_LEIXX_Q6AD21; (db=BlastProDom db_id=PD001179 from=263 to=321 evalue=2.0e-06 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: BlastProDom |
null | null | null | 2.00e-06 | tto:Thethe_00412 |
| RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=5 to=324 evalue=30.373 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 3.04e+01 | tto:Thethe_00412 |
| DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT02481.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KKT02481.1};; TaxID=1619068 species="Bacteria; Peregrin |
UNIPROT
DB: UniProtKB |
100.0 | 325.0 | 628 | 7.40e-177 | A0A0G1DX63_9BACT |
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