ggKbase home page

13_1_20cm_2_scaffold_20_4

Organism: 13_1_20CM_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 3030..3413

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator NikR, CopG family n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9P7_METSL similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 127.0
  • Bit_score: 119
  • Evalue 1.80e-24
Transcriptional regulator CopG family (NikR) {ECO:0000313|EMBL:AIF11212.1}; TaxID=1456173 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_51_A05 UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 127.0
  • Bit_score: 120
  • Evalue 1.50e-24
transcriptional regulator, CopG family similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 125.0
  • Bit_score: 120
  • Evalue 3.00e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured marine thaumarchaeote KM3_51_A05 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 384
ATGCCGATCGTTAGCGTCTCCTTACCGAGTGAACTCATCGATTCAATGGCCGTGATTCAGGAATCGCAAGGATACGCAGGAAGGTCCGACGTAGTCAGAGCTGCGATACGCCTCCTGCTATCCGACACTAGGGAGAAAGGGTCGTTTGCTGGGCGGGTCACAGCAATTCTTGTGGTTACACATGACGAATCCAATGAAGAACCGATCACTCGGCTAAAGCACACCTACGACGACATCGTTCGAACACACATTCACAATAAGTTGGGCCAAAACAATTGCTTCGAGCTCTTTTTGCTAGAGGGAGAGGGGAAGAAGATCGCCTCAATGACTAGCGCATTCCAGAAGGAGAGAAAGCTGAGAAGCGTTAAGCTTCTCGTAATATAG
PROTEIN sequence
Length: 128
MPIVSVSLPSELIDSMAVIQESQGYAGRSDVVRAAIRLLLSDTREKGSFAGRVTAILVVTHDESNEEPITRLKHTYDDIVRTHIHNKLGQNNCFELFLLEGEGKKIASMTSAFQKERKLRSVKLLVI*