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gwa2_scaffold_412

Alias: zPERA2_38_36_6

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Displaying items 91-108 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_412_91
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

102652..103893
DNA (1242bp) protein (414aa)
Type IV-A pilus assembly ATPase PilB n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV4_THEYD rbh
Type IV-A pilus assembly ATPase PilB, type IV pilus assembly protein PilB {ECO:0000313|EMBL:KKR06640.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW201
pilB1; type IV-A pilus assembly ATPase PilB
seg (db=Seg db_id=seg from=158 to=169)
gwa2_scaffold_412_92
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

103893..105206
DNA (1314bp) protein (438aa)
Pilus tip-associated protein n=2 Tax=Rubrivivax RepID=F3LRJ6_9BURK
Type IV pilus assembly protein PilC, type IV pilus assembly protein PilC {ECO:0000313|EMBL:KKR06641.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011
pilC; type IV pilus assembly protein PilC
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
gwa2_scaffold_412_93
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

105335..105835
DNA (501bp) protein (167aa)
General secretion pathway protein G n=3 Tax=Pseudomonas RepID=I4XP93_9PSED
General secretion pathway protein G Tax=zPERA2_38_36
secretion system protein G
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=5 to=25 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
gwa2_scaffold_412_94
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

105963..106337
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06643.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=6 to=18)
gwa2_scaffold_412_95
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

106443..118592
DNA (12150bp) protein (4050aa)
Peptidoglycan-associated outer membrane protein n=1 Tax=Ignavibacterium album JCM 16511 RepID=I0AK00_IGNAJ
Peptidoglycan-associated outer membrane protein {ECO:0000313|EMBL:KKR06644.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
peptidoglycan-associated outer membrane protein
coiled-coil (db=Coil db_id=coil from=987 to=1008 evalue=NA)
gwa2_scaffold_412_96
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

118589..119182
DNA (594bp) protein (198aa)
transmembrane_regions Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=22 to=37)
gwa2_scaffold_412_97
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

119188..119865
DNA (678bp) protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06646.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
coiled-coil (db=Coil db_id=coil from=147 to=168 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=7 to=21)
gwa2_scaffold_412_98
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

119840..121657
DNA (1818bp) protein (606aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06647.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
seg (db=Seg db_id=seg from=325 to=366)
gwa2_scaffold_412_99
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

121647..122798
DNA (1152bp) protein (384aa)
coiled-coil Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=336 to=357 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
gwa2_scaffold_412_100
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(122949..123146)
DNA (198bp) protein (66aa)
Tax=PER_GWF2_38_29
gwa2_scaffold_412_101
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(123157..123438)
DNA (282bp) protein (94aa)
DNA-binding protein, excisionase family n=1 Tax=Rhizobium sp. CF142 RepID=J2B162_9RHIZ
DNA-binding protein, excisionase family Tax=zPERA2_38_36
excisionase family DNA binding domain-containing protein
excise: DNA binding domain, excisionase fami (db=HMMTigr db_id=TIGR01764 from=5 to=53 evalue=4.2e-12 interpro_id=IPR010093 interpro_description=Excisionase/Xis, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
gwa2_scaffold_412_102
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(123756..124049)
DNA (294bp) protein (98aa)
Tax=zPERA2_38_36
gwa2_scaffold_412_103
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(124120..127038)
DNA (2919bp) protein (973aa)
UvrABC system protein A n=1 Tax=Thermincola potens JR RepID=D5XCB4_THEPJ rbh
Excinuclease ABC subunit A, excinuclease ABC subunit A {ECO:0000313|EMBL:KKR06652.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
excinuclease ABC subunit A
uvra: excinuclease ABC subunit A (db=HMMTigr db_id=TIGR00630 from=5 to=959 evalue=0.0 interpro_id=IPR004602 interpro_description=Excinuclease ABC, A subunit GO=Biological Process: nucleotide-excision repair (GO:0006289), Cellular Component: excinuclease repair complex (GO:0009380), Molecular Function: excinuclease ABC activity (GO:0009381))
gwa2_scaffold_412_104
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(127242..127898)
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06653.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
coiled-coil (db=Coil db_id=coil from=113 to=134 evalue=NA)
gwa2_scaffold_412_105
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(127920..128519)
DNA (600bp) protein (200aa)
coiled-coil Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=162 to=183 evalue=NA)
gwa2_scaffold_412_106
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(128557..129309)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VN72_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KKR06655.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=23)
gwa2_scaffold_412_107
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

129548..130441
DNA (894bp) protein (298aa)
Tax=zPERA2_38_36
gwa2_scaffold_412_108
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

130434..131132
DNA (699bp) protein (233aa)
Uncharacterized LmbE family protein n=1 Tax=Moorea producens 3L RepID=F4Y2A1_9CYAN
Uncharacterized LmbE family protein Tax=zPERA2_38_36
LmbE family protein
(db=HMMPfam db_id=PF02585 from=5 to=137 evalue=2.0e-25 interpro_id=IPR003737 interpro_description=N-acetylglucosaminyl phosphatidylinositol deacetylase)
Displaying items 91-108 of 108 in total

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