ggKbase home page

gwa2_scaffold_228_86 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Transcription antitermination protein nusG n=4 Tax=Desulfotomaculum RepID=A4J0Z8_DESRM similarity UNIREF
DB: UNIREF90
58.0 0.0 217 2.00e+00 dca:Desca_0199
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=PER_GWF2_38_29 UNIPROT
DB: UniProtKB
100.0 181.0 371 9.10e-100 ggdbv1_5095808
NusG antitermination factor similarity KEGG
DB: KEGG
57.8 180.0 220 3.10e-55 dca:Desca_0199
NUSG (db=PatternScan db_id=PS01014 from=164 to=173 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 dca:Desca_0199
no description (db=HMMSmart db_id=SM00739 from=127 to=154 evalue=0.0027 interpro_id=IPR005824 interpro_description=KOW) iprscan interpro
DB: HMMSmart
0.0 0.0 0 2.70e-03 dca:Desca_0199
NUSGTNSCPFCT (db=FPrintScan db_id=PR00338 from=64 to=76 evalue=1.5e-17 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 dca:Desca_0199
(db=HMMPfam db_id=PF02357 from=11 to=108 evalue=1.7e-23 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Biological Process: positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 dca:Desca_0199
no description (db=HMMSmart db_id=SM00738 from=9 to=117 evalue=1.9e-37 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Biological Process: positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.00e+00 dca:Desca_0199
(db=HMMPfam db_id=PF00467 from=130 to=159 evalue=2.5e-05 interpro_id=IPR005824 interpro_description=KOW) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 dca:Desca_0199
N-utilization substance G protein NusG, N-terminal domain (db=superfamily db_id=SSF82679 from=9 to=121 evalue=3.1e-34 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Biological Process: positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 dca:Desca_0199
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=124 to=181 evalue=5.7e-18 interpro_id=IPR008991 interpro_description=Translation protein SH3-like) iprscan interpro
DB: superfamily
0.0 0.0 0 5.00e+00 dca:Desca_0199
no description (db=Gene3D db_id=G3DSA:3.30.70.940 from=9 to=121 evalue=6.9e-36 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Biological Process: positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968)) iprscan interpro
DB: Gene3D
0.0 0.0 0 6.00e+00 dca:Desca_0199
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=12 to=181 evalue=7.0e-70 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Biological Process: regulation of transcription elongation, DNA-dependent (GO:0032784)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 7.00e+00 dca:Desca_0199