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gwa2_scaffold_525_20 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase, sigma-24 subunit, ECF subfamily n=4 Tax=Geobacillus RepID=I0U303_BACTR similarity UNIREF
DB: UNIREF90 		35.0 0.0 120 3.00e+00 gmc:GY4MC1_0153
Sigma-24 (FecI-like protein), RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:KKR04963.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2 UNIPROT
DB: UniProtKB 		100.0 176.0 355 5.00e-95 A0A0G0MPA4_9BACT
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG 		35.1 171.0 121 3.20e-25 gmc:GY4MC1_0153
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=7 to=172 evalue=1.9e-46 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698 iprscan interpro
DB: HMMTigr 		0.0 0.0 0 1.00e+00 gmc:GY4MC1_0153
(db=HMMPfam db_id=PF04542 from=13 to=78 evalue=1.0e-22 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 1.00e+00 gmc:GY4MC1_0153
(db=HMMPfam db_id=PF08281 from=119 to=166 evalue=1.5e-12 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 1.00e+00 gmc:GY4MC1_0153
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=109 to=174 evalue=1.5e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily 		0.0 0.0 0 1.00e+00 gmc:GY4MC1_0153
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=1 to=75 evalue=6.2e-26 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor iprscan interpro
DB: superfamily 		0.0 0.0 0 6.00e+00 gmc:GY4MC1_0153
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=1 to=79 evalue=7.7e-24) iprscan interpro
DB: Gene3D 		0.0 0.0 0 7.00e+00 gmc:GY4MC1_0153