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gwa2_scaffold_525_21 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNP-1 like RNA-binding protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LED5_SYNFM similarity UNIREF
DB: UNIREF90
57.0 0.0 133 3.00e+00 ctm:Cabther_B0189
RNP-1 like protein RNA-binding protein {ECO:0000313|EMBL:KKR04964.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;" UNIPROT
DB: UniProtKB
100.0 116.0 237 1.30e-59 A0A0G0MLQ9_9BACT
RNA-binding proteins (RRM domain) similarity KEGG
DB: KEGG
59.1 110.0 132 9.20e-29 ctm:Cabther_B0189
seg (db=Seg db_id=seg from=88 to=116) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 ctm:Cabther_B0189
GLYCINE-RICH RNA-BINDING PROTEIN (db=HMMPanther db_id=PTHR10432:SF31 from=4 to=113 evalue=1.1e-32) iprscan interpro
DB: HMMPanther
0.0 0.0 0 1.00e+00 ctm:Cabther_B0189
RNA-BINDING PROTEIN (db=HMMPanther db_id=PTHR10432 from=4 to=113 evalue=1.1e-32) iprscan interpro
DB: HMMPanther
0.0 0.0 0 1.00e+00 ctm:Cabther_B0189
no description (db=Gene3D db_id=G3DSA:3.30.70.330 from=3 to=116 evalue=1.2e-30 interpro_id=IPR012677 interpro_description=Nucleotide-binding, alpha-beta plait GO=Molecular Function: nucleotide binding (GO:0000166)) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 ctm:Cabther_B0189
(db=HMMPfam db_id=PF00076 from=5 to=74 evalue=1.8e-23 interpro_id=IPR000504 interpro_description=RNA recognition motif domain GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 ctm:Cabther_B0189
no description (db=HMMSmart db_id=SM00360 from=4 to=77 evalue=1.2e-28 interpro_id=IPR000504 interpro_description=RNA recognition motif domain GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.00e+00 ctm:Cabther_B0189
RNA-binding domain, RBD (db=superfamily db_id=SSF54928 from=3 to=113 evalue=2.2e-32) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 ctm:Cabther_B0189
RRM (db=ProfileScan db_id=PS50102 from=3 to=81 evalue=20.9 interpro_id=IPR000504 interpro_description=RNA recognition motif domain GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 2.00e+01 ctm:Cabther_B0189