ggKbase home page

S3_scaffold_2909_curated_2

Organism: S3_RifleGW_Spirochaetes_52_8_curated

near complete RP 46 / 55 MC: 3 BSCG 46 / 51 MC: 3 ASCG 9 / 38 MC: 1
Location: comp(326..1051)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase id=3871580 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 240.0
  • Bit_score: 391
  • Evalue 6.20e-106
  • rbh
pseudouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 241.0
  • Bit_score: 345
  • Evalue 1.10e-92
  • rbh
Tax=BJP_08E140C01_Spirochaeta_53_29 similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 240.0
  • Bit_score: 391
  • Evalue 5.10e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_Spirochaeta_53_29 → Spirochaeta → Spirochaetales → Spirochaetia → Spirochatetes → Bacteria

Sequences

DNA sequence
Length: 726
ATGAAGATTGATTATCCTATCCGCCTGCAGAGCTATCTGGCGAAAAGTGGATTTGGTTCCCGTAGAGCATGTGAAATCTTGATCGCAGGGGGGCATGTCTCCGTCAACAACAAGACTGTTACCGAGATGGGGGTGAAGGTCGAATCCGATGATGTCGTGTTGGTGGACACCGTTCTTGCAGAACCCTCCGACAGAATCCTCTATTACGCACTGAACAAACCTAGAGGTTATGTCTGCACGAATTATGACCCGAATGAGAAACTATACGCCCGGGACCTGATCAACATAGCCGATAGCAACCTGCTTTTCCATGTAGGCCGGCTCGATAAGGACTCCTCCGGACTTATACTTTTCACCAATGATGGCGATACTGCTCAGAAAATCATGCATCCGTCTTCCGAAATCGAAAAGGAATACGCGGTGATGACTACCGAGCCTTTGGAGCGCATCCATCTTGAAGATGCCTTAAGAGGTATCTATATAGATAATCAGAAGCCATATACCATCAAGAATTTCGCGATCAAGTCCAAACGTTGGGTCTCGATTACGTTGACAGAAGGGAAAAACAGGGAATTGCGCAAGATCTTCAGTTATTTCGGCTACACTATCGAGCGGCTGGTCCGTATCCGGATCGGTCCTATTAAACTTGGCACCCTCCCAGAGGGCAAGTTCAGGCCTGTGACTAAGAGCGAGATCAAAGCTTTGCTGGAGGGAAAGAACGAATGA
PROTEIN sequence
Length: 242
MKIDYPIRLQSYLAKSGFGSRRACEILIAGGHVSVNNKTVTEMGVKVESDDVVLVDTVLAEPSDRILYYALNKPRGYVCTNYDPNEKLYARDLINIADSNLLFHVGRLDKDSSGLILFTNDGDTAQKIMHPSSEIEKEYAVMTTEPLERIHLEDALRGIYIDNQKPYTIKNFAIKSKRWVSITLTEGKNRELRKIFSYFGYTIERLVRIRIGPIKLGTLPEGKFRPVTKSEIKALLEGKNE*