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S5_scaffold_2604_curated_5

Organism: S5_RifOxy_Bacteroidetes_44_7_curated

partial RP 31 / 55 MC: 5 BSCG 33 / 51 MC: 7 ASCG 9 / 38 MC: 3
Location: comp(3945..4274)

Top 3 Functional Annotations

Value Algorithm Source
Cro/Cl family transcriptional regulator n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BX28_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 109.0
  • Bit_score: 96
  • Evalue 1.40e-17
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:ERM81176.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 109.0
  • Bit_score: 96
  • Evalue 2.00e-17
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 105.0
  • Bit_score: 87
  • Evalue 1.40e-15

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Taxonomy

Rhodonellum psychrophilum → Rhodonellum → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 330
ATGTTACCGGAAAACATTCGTGCACTGCGTAAAAAACAAGGTTACACACAAGAACAATTGGCAGCCTACCTCGGCATTTCAACAGCTGCAGTAACCCAGTATGAGACTGGAGCAAGAGTTGTTCCAGCCCCAACAGTTAGCAAATTAGCTATTCTATTCAACGTTGAAGAATACGAAATGTATCAGGAAGAACCTCAACAAATGCAACTTCTTTCTGCCTTTGCATTTCGCGCAGGTGAATTGGATACTCAAGACTTGAAATCAATTTCCGAGTTTAAAAAAGTTGTACTCAATTATTTCTACCTCTCAACTGCATTGCAAAATGAGTGA
PROTEIN sequence
Length: 110
MLPENIRALRKKQGYTQEQLAAYLGISTAAVTQYETGARVVPAPTVSKLAILFNVEEYEMYQEEPQQMQLLSAFAFRAGELDTQDLKSISEFKKVVLNYFYLSTALQNE*