ggKbase home page

S5_scaffold_5546_curated_1

Organism: S5_RifOxy_Bacteroidetes_44_7_curated

partial RP 31 / 55 MC: 5 BSCG 33 / 51 MC: 7 ASCG 9 / 38 MC: 3
Location: comp(1..792)

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9RQ41_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 250.0
  • Bit_score: 166
  • Evalue 2.70e-38
TonB-dependent receptor {ECO:0000313|EMBL:GAO30835.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 206.0
  • Bit_score: 174
  • Evalue 1.40e-40
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 276.0
  • Bit_score: 147
  • Evalue 2.80e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 792
ATGGATTTTAAAAGCAATATCATGAACATGAGACAAATATATAAATTGAAACATATGAGCAAAATAGTTTTCGATATAAGGAAATTAAAATCCATTGCGCTTGTTGTGCTGTTATTTGCCGGCACAGCCCTTATTGCACAGGATAATGCGCCGGGACCGGTAGCTCAGGGCAAGGTAGTCGATGCTATCACCGGACAACCTATCTCAGCAGCCCAGATATCAGTACCCGACAAGAATGTGTCTGCATTGACTGATGAGGATGGAAACTTTAGTATAAAGATAACTTCTCCCAACGACATCCTCGTAGTAGGTGCTATTGGGTATGATGTACGTGAAGTAGGTCTGCAGGGAAGTAAAAGCATTACAGTTAAACTTTATCAGGAAGGTTTCAGCAATTATTTCAAGGAATTGCGCAGTGTAACCGGAATGCAGCGTCAGACCCAGGCAACAGCTTCTGTTGTGTCGGTTGATGCTCCCGACAGTTACTCTACTGTAATCGTCGACGATATATTACAAAAGTCGATGGGTGCTAACATACGTAGCGTTGCACGTTCGGGGCAGTCGGGTATTGGATCAAATATCTTTATCCGCGGTATCAACTCAATCAATGCCAATGCGCAACCTCTGTTCGTTGTTGACGGGGTAATCTGGAATAATTTTCAAGATATAACTTCTATACATGGTGGACACTTTTCAAATCCTCTTGACGATTTGAATCCCAATGATATTGAGAGTATTTCCGTATTAAAAGACGGAGCATCAATCTATGGAAGCAAAGCTTCGAATGGTGTG
PROTEIN sequence
Length: 264
MDFKSNIMNMRQIYKLKHMSKIVFDIRKLKSIALVVLLFAGTALIAQDNAPGPVAQGKVVDAITGQPISAAQISVPDKNVSALTDEDGNFSIKITSPNDILVVGAIGYDVREVGLQGSKSITVKLYQEGFSNYFKELRSVTGMQRQTQATASVVSVDAPDSYSTVIVDDILQKSMGANIRSVARSGQSGIGSNIFIRGINSINANAQPLFVVDGVIWNNFQDITSIHGGHFSNPLDDLNPNDIESISVLKDGASIYGSKASNGV